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13_2_20cm_scaffold_1240_11

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: comp(10900..12333)

Top 3 Functional Annotations

Value Algorithm Source
ntrC; nitrogen regulation protein NR(I); K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 472.0
  • Bit_score: 811
  • Evalue 6.90e-232
Putative Nitrogen assimilation transcription regulatory protein (NtrC)(Synonyms:glnT, glnG) id=2650854 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 473.0
  • Bit_score: 734
  • Evalue 7.70e-209
gnfM; nitrogen fixation master sigma-54-dependent transcriptional response regulator similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 473.0
  • Bit_score: 493
  • Evalue 8.40e-137

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGGCCGCTCGCATCCTGATCGCCGACGACGAAGACAGCCTGCGCTGGGTCCTCGAGAAAGGCCTGCGCGGCGTCGGCTATGACGTCACGTCGGTGAAGGACGGCGAGGAGGCGGTGCGGGTCTTCGAGGCACAGCCCTTCGACCTCGTGTTCCTCGACGTCCGCATGCCGGGCCTGGATGGCCTCACGGCCCTGGAGCGGATCCGTGACCTCCGCCCCGACGTCTACGTCATCGTCATGACCGCCCACGGCTCCATGGACACCGCCATCAAGGCGATGCAGCGCGGCGCCTATGACTATCTCAACAAGCCGTTCGACCTCGACGAGGTGCTGCTGCTCAGCGAGCGCGCGCTGGCCGCCAGCCGGCTCACGCAGGAGGTCGCGCGGCTCCGCACGGGGCTCGCGGAAGTGCGCGAGTTCAGCGCGCTCATCGGCCGGCACCCGCGGATGCAGGACGTCTACAAGACGATCGGCCGCATCGCCGGCACCGACGTCACCGTGCTCTTGCGCGGCGAGTCGGGTACCGGCAAGGAGCTGGTCGCGCGCGCGATCCATCACTACAGCCGGCGTTCGGGCCGCCCGTTCGTGGCGGTCTCCTGCGCCGCCATCCCAGGCACGCTGCTCGAATCGGAGATGTTCGGCCACGAGCGTGGCGCGTTCACCGACGCCAAGGAGCGGCGGCTCGGCAAGTTCGAGCTCGCCCACGGCGGCACGCTCTACCTCGACGAGATCGGCGACACGCCGGTCGATCTCCAGACCAAGCTGCTGCGCGCGCTCCAGGAGCGGACGATCGAACGCGTGGGCGGCCACGAGTCGATCGCCATCGACGTGCGCGTGCTGGCCGCCACCAATCGCGATCTGGAAGCCCTCATGAAGGAGGGCCGCTTCCGCGAGGATCTCTACTACCGGCTCAACGTGGTGACCGTCAACCTGCCGCCCCTGCGCGAGCGGCGCCGCGACATCCCGCTGCTCGTCGAGCACTTCCTGGCCAAGCACGTCGAGGAGCTGGGCGAGCGCGGCGTGGCGCCGGAGGCGCTCGACCGGCTGGTCGGCTACGACTGGCCGGGCAACGTGCGCGAGCTCGAGAACGTCGTCCAGCGGGCCATGGTGATGGCCACGGCCGGCGTCATCCTGCCCGAGCACCTGCCGATCGGGCCGGTGTCGGCGGCAGCGTCGGTGGCCGTGGACGCCACGCTCGAGGAGATCATCGAGCGCAAGCTGATGGAGTGCGTGCGCGGCCTGCGCGAGCGCTCGAGCGCGAACCTCTACGACCTCGTGGTCGGCCTCGTCGAGAAGCCGCTGCTTCGCGCCGTGCTGCGCGAGACGAGCGGCAACCAGGTGCGGGCCGCGCAGATCCTCGGCATCAACCGCAACACGCTGCGCAAGAAGCTCACCGAGCACGGGATCGATCCCGACGCCATAACGAGCGCCTAG
PROTEIN sequence
Length: 478
MAARILIADDEDSLRWVLEKGLRGVGYDVTSVKDGEEAVRVFEAQPFDLVFLDVRMPGLDGLTALERIRDLRPDVYVIVMTAHGSMDTAIKAMQRGAYDYLNKPFDLDEVLLLSERALAASRLTQEVARLRTGLAEVREFSALIGRHPRMQDVYKTIGRIAGTDVTVLLRGESGTGKELVARAIHHYSRRSGRPFVAVSCAAIPGTLLESEMFGHERGAFTDAKERRLGKFELAHGGTLYLDEIGDTPVDLQTKLLRALQERTIERVGGHESIAIDVRVLAATNRDLEALMKEGRFREDLYYRLNVVTVNLPPLRERRRDIPLLVEHFLAKHVEELGERGVAPEALDRLVGYDWPGNVRELENVVQRAMVMATAGVILPEHLPIGPVSAAASVAVDATLEEIIERKLMECVRGLRERSSANLYDLVVGLVEKPLLRAVLRETSGNQVRAAQILGINRNTLRKKLTEHGIDPDAITSA*