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13_2_20cm_scaffold_3083_10

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: comp(5246..6592)

Top 3 Functional Annotations

Value Algorithm Source
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 449.0
  • Bit_score: 730
  • Evalue 1.50e-207
Signal recognition particle protein id=4505277 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 447.0
  • Bit_score: 652
  • Evalue 2.80e-184
signal recognition particle subunit FFH/SRP54 (srp54) similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 447.0
  • Bit_score: 530
  • Evalue 3.40e-148

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGTTCGACTCACTCAGCACGAGACTGCAGACCGTCTTCGACCGTCTCGGAGGCCGCGGACGCCTCACCGAGGAGAACATCCAGGAAGCCCTGCGCGAGGTTCGCGTGGCGCTCCTGGAGGCGGACGTCAACTTCAAGGTCGTCCGCGAGTTCATCGAGCGGGTGAGGGTGAGGGCGATCGGCCAGGACGTGCTGACCTCGCTCACGCCCGCCCAGCAGGTCGTCAAGGTCGTCCACGGCGAGCTGGTCGAATTGCTCGGCGGCAGTGGCCATCGACTCTCGCCGGCCGCCCATCCACCGACGATCGTCATGCTGATCGGGCTGCAGGGCTCGGGCAAGACGACGACGGCGGCCAAGCTCGCCCGGCTCTACGCCAAGCAGGGTCAGCACCCGATCCTGGCCGCCGCCGATATTTATCGTCCAGCCGCGCAGGACCAGCTCCGAACGCTCGGCGAGCAGCTCAATGTCCCGGTCGTCGGTGGCCCGAAGCAGAAGCCGCTCGAGATCTGCCGCCAGGCGCGCGCCGAGGCGGCCGAGCGCGGCCTCACGCCGCTCCTCCTCGACACCGCGGGGCGCCTGCACATCGACGAGACGATGCTGGACGAGCTCAGGGCGATCCGGGCCGAGCTGAAGCCGCACCACGTGCTGCTCGTCGTGGACGCCATGACCGGTCAGGACGCGGTGACCGTGGCCGAGCGGTTCAACGCGGCCGTCGGGATCGACGCCGTCGTCCTCACCAAGATGGACGGCGATTCGCGTGGGGGCGCCGCCCTGAGCGTTCGCCACGTGACCGGACGGCCCATCGCCTTCGTGGGCATGGGCGAGAAGACCGACGCGCTCGAGCCGTTCCATCCCGATCGGGTGGCCTCGCGCATCCTCGGCATGGGCGACGTGCTGTCGCTCGTGGAGAAGGCCCAGGAAGCGGTCGATCAGAAGAAGGCCGAAGAGCTGGTGCGCAAGCTGCGCGAGGACGCGTTCACCCTGGACGACTTCCGCGAGCAGCTCAAGCAGCTCCGATCCATGGGCCCGCTCGACCAGATCCTCGGCATGCTGCCCTTCGGCAAGATGCTCAAGGGCGCGCCGAAGGAGCTCGACGCCGAGCAGGCCGACATCGGCCGCTTCGATGCGATCATCAGCTCGATGACGCCGGACGAGCGCCGGCGGCCCGAGGTGATCAACGGCAGCCGGCGCCAGCGCATCGCCCGCGGCAGCGGGACCAGCGTGCAAGACGTCAATCGGCTCCTCAAGCAGTACGCGCAGCTCCGGAAGATGATGAAGCAGTTCAAGGGGCTCGAGGGCAAGCTTCCACGGATGAAGCTGCCCGGGCTCCCCAACCTGGGGGGGTGA
PROTEIN sequence
Length: 449
MFDSLSTRLQTVFDRLGGRGRLTEENIQEALREVRVALLEADVNFKVVREFIERVRVRAIGQDVLTSLTPAQQVVKVVHGELVELLGGSGHRLSPAAHPPTIVMLIGLQGSGKTTTAAKLARLYAKQGQHPILAAADIYRPAAQDQLRTLGEQLNVPVVGGPKQKPLEICRQARAEAAERGLTPLLLDTAGRLHIDETMLDELRAIRAELKPHHVLLVVDAMTGQDAVTVAERFNAAVGIDAVVLTKMDGDSRGGAALSVRHVTGRPIAFVGMGEKTDALEPFHPDRVASRILGMGDVLSLVEKAQEAVDQKKAEELVRKLREDAFTLDDFREQLKQLRSMGPLDQILGMLPFGKMLKGAPKELDAEQADIGRFDAIISSMTPDERRRPEVINGSRRQRIARGSGTSVQDVNRLLKQYAQLRKMMKQFKGLEGKLPRMKLPGLPNLGG*