ggKbase home page

13_2_20cm_scaffold_783_23

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: 19655..20983

Top 3 Functional Annotations

Value Algorithm Source
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 442.0
  • Bit_score: 799
  • Evalue 2.50e-228
rho; transcription termination factor Rho id=14625929 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 418.0
  • Bit_score: 746
  • Evalue 1.40e-212
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 413.0
  • Bit_score: 642
  • Evalue 8.00e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGAGCGCCCGCCGAGACCGAGGCCAAGGCAGCAACCCAACCGCCGAGAGTGCCGCTCAATCTGCCGCCGGAGGGATGAACCTCTCCGAGCTGAAAGAAAAGAGCATCCCCGACCTCAACGGCATTGCCCGCGAGATGAACATCCAGAACGTCGGCGGCCTGCGCAAGCAGGAACTGATCTTCAAGATCCTCCAGTCTCAAGCGGAGAAGGATGGGCTCATCTACGCCGAGGGCGTGCTCGAGGTCCTTCCCGACGGCTTCGGCTTCTTGCGTGCGCCCGACTACAACTATCTGCCCGGCCCCGACGACATCTACGTCTCGCCCTCGCAGATCCGGCGCTTCGACCTGCGCACCGGCGACACGATCTCCGGCCAGGTCCGTCCGCCCAAGGACTCCGAGCGGTATTTCGCGCTGCTCAAAGTGGAGTCGATCAACTTCGAGGCGCCGGAGGCGGCGCGCGACAAGATCCTCTTCGACAACCTCACGCCGCTCTATCCGATGGAGCGGCTGCGCCTGGAGCACACGACTGAGAACCTGACCACGCGGGTCATGGATCTTCTCTGCCCGATCGGCAAGGGCCAGCGCGGCATGATCGTGGCGGCGCCGCGCACCGGCAAGACGATGATGCTGCAGTCCATCGCGCACGCCATCGCGGCGAACCACCCCGAGGTCTATCTCATCGTGCTGCTCATCGACGAGCGGCCAGAAGAAGTCACTGACATGCAGCGGACCGTCAAGGGCGAGGTCATCTCCTCGACCTTCGACGAGCCGCCCCAGCGCCACATCCAGGTCGCCGACATGGCCATCGAGAAGGCCAAGCGCCTCGTCGAGCACAAGCGCGACGTGGTGATCCTGCTCGACTCGCTCACGCGGTTCGCGCGGGCCCACAACGCCATCATCCCGTCGTCGGGCAAGGTGCTCTCGGGCGGCCTCGACGCCAACGCGCTCCAGCGCCCCCGGCGCTTCTTCGCCACCGCCCGCAACATCGAGGAGGGCGGCTCGCTCACGATCATGGCGACCGCCATCGTGGACACGGGCAGCCGGATGGACGACGTGATCTTCGAGGAGTTCAAGGGCACCGGCAACATGGAGGTCCACCTCGACCGGCGGTTGATGGACAAGCGCATCTTCCCCACGATCAACATCGAGCAGTCGGGCACCCGCAAGGAGGAGCTGCTCCTCGAGAAGGACGAGCTCCAGAAGGTGTGGCTGCTCCGCAAGGCGCTGTCCCAGCTGAATCCCGTCGAAGCGATGGAGCTCCTGCTCGACAAGCTCAAGCTGACGAAGACGAACAAAGAGTTCCTGGCCTCGATGCACTCGATGGGTTAG
PROTEIN sequence
Length: 443
MSARRDRGQGSNPTAESAAQSAAGGMNLSELKEKSIPDLNGIAREMNIQNVGGLRKQELIFKILQSQAEKDGLIYAEGVLEVLPDGFGFLRAPDYNYLPGPDDIYVSPSQIRRFDLRTGDTISGQVRPPKDSERYFALLKVESINFEAPEAARDKILFDNLTPLYPMERLRLEHTTENLTTRVMDLLCPIGKGQRGMIVAAPRTGKTMMLQSIAHAIAANHPEVYLIVLLIDERPEEVTDMQRTVKGEVISSTFDEPPQRHIQVADMAIEKAKRLVEHKRDVVILLDSLTRFARAHNAIIPSSGKVLSGGLDANALQRPRRFFATARNIEEGGSLTIMATAIVDTGSRMDDVIFEEFKGTGNMEVHLDRRLMDKRIFPTINIEQSGTRKEELLLEKDELQKVWLLRKALSQLNPVEAMELLLDKLKLTKTNKEFLASMHSMG*