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13_2_20cm_scaffold_827_16

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: 9632..10156

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 174.0
  • Bit_score: 238
  • Evalue 5.20e-60
RNA polymerase, sigma-24 subunit, ECF subfamily id=4029898 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 170.0
  • Bit_score: 229
  • Evalue 2.30e-57
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 170.0
  • Bit_score: 120
  • Evalue 4.10e-25

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGGGTCAACAGCCTTTCGAGACCATCCTGGAAGCTCATCATGCGGAGATCTATCGGTACCTCCGCCGGGTCACCTCGCGCGCCGCCGAAGCCGACGACCTTTCCCAGGAAACCTTCCTGCGCGCCTATCGCGCGTATCGGGCCCTGCCGTCGGACGCCAACGTGAGGGCCTGGCTGTTCACCATCGCCACCAACCTCGCCCGGAACCACTTCCGCTCCGAGGGGCGTCGAAGCCGCGCCCATGCCGCGGTCATCGTCTCCCGGAGCGCTCTCGATGACGGGGCCGGGCCCGAGGGCGAAACACTCTTCAACGAGACGCGGGCACGCGTCGAAGCGGTGGTGGAGCGGCTGCCGCTTCGCCAGCGCCTGGCCTTCATATTGAGGAAAATCCACGACGTCGACTACGAAGTCATTGCGCGTAGCCTGGACTGTTCGGCGGAGACGGCGCGGGCCCACGTGTTTCAGGCCCTCCGCAAGATCCGCCAGAGCCTGGGCGAATCGCAGCAGATGGAGATCCAGCGATGA
PROTEIN sequence
Length: 175
MGQQPFETILEAHHAEIYRYLRRVTSRAAEADDLSQETFLRAYRAYRALPSDANVRAWLFTIATNLARNHFRSEGRRSRAHAAVIVSRSALDDGAGPEGETLFNETRARVEAVVERLPLRQRLAFILRKIHDVDYEVIARSLDCSAETARAHVFQALRKIRQSLGESQQMEIQR*