ggKbase home page

13_2_20cm_scaffold_2371_1

Organism: 13_2_20CM_Rokubacteria_69_15_2

partial RP 36 / 55 MC: 1 BSCG 35 / 51 ASCG 8 / 38
Location: comp(220..678)

Top 3 Functional Annotations

Value Algorithm Source
anti-ECFsigma factor, ChrR id=14429568 bin=bin3_NC10 species=Afipia birgiae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 129.0
  • Bit_score: 167
  • Evalue 1.20e-38
anti-ECFsigma factor, ChrR Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 129.0
  • Bit_score: 167
  • Evalue 1.70e-38
Germin-like protein subfamily 2 member 2 Flags: Precursor similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 125.0
  • Bit_score: 81
  • Evalue 3.20e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 459
ATGAACAGCGTCCTCAAGGGAGTTCTGTCGCGCGGCGGTGCCGACCTGTTGCAGTTGGCGATGGGAATCGCGGGCTCGGTTTTCTCCGTGACGATCTTTCTCATGCCGATGTTGGCATTCGCGCAAGGCCACGCCATCGTCGCGCCAGGCCAACTGGTCTGGAAGCCGCTCATCCCCGGCGTTGAAATGGCCGTCGTCTCCGGCGACCCAGGCAAGAAGGGTGGCCTGTACGTGATCCGCATCCGTAGTAAAGGAGAGGTCAAGGTGCCGCCCCACTGGCATCCGACCGGCGAACACGTCACGGTGCTGGCGGGCTCGTTCCTGATGGCTCGTGGCGAGAAATACGATGCATCGAGGCTGATCGAGCTGAAGCCTGGTGCGCACTCCTTGATGCCGGCAACGATGGCCCACTTCCGCCAAGAAATGAGCGCGAGGCACAGATGGGAAAGTCATTCGTAA
PROTEIN sequence
Length: 153
MNSVLKGVLSRGGADLLQLAMGIAGSVFSVTIFLMPMLAFAQGHAIVAPGQLVWKPLIPGVEMAVVSGDPGKKGGLYVIRIRSKGEVKVPPHWHPTGEHVTVLAGSFLMARGEKYDASRLIELKPGAHSLMPATMAHFRQEMSARHRWESHS*