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13_2_20cm_scaffold_3737_3

Organism: 13_2_20CM_Rokubacteria_69_15_2

partial RP 36 / 55 MC: 1 BSCG 35 / 51 ASCG 8 / 38
Location: comp(2462..3925)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 485.0
  • Bit_score: 766
  • Evalue 2.00e-218
RNA polymerase sigma-54 factor id=3879943 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 488.0
  • Bit_score: 764
  • Evalue 5.40e-218
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 487.0
  • Bit_score: 428
  • Evalue 2.00e-117

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1464
ATGGCCATCGAAGCGCGCCTCTCCCTCCGGCAGAGCCAGCGGCTCGTCATGACCCCGCTGCTCCAGCAGGCGATCCAACTCCTCCAGCTCTCCACGCTCGAGCTTCAGGACGTCGTGCAGAAAGAGCTCCTCGAGAACCCGCTGCTGGAAGAGGTGCCGGCGGACGGCGGCGAGACCCCGGATGGAGGCGAGGTCGCGCCGAGCGCCGAGGCGACGCCGGCGCCGACCGTGGAGCCGATCACCACCGATCCGCCCCCGACCGCCGAACGGCAGACCGACGACCTGCCGTTCGACCCGATCGCCGTGCTGTTCGACGAACCGGAGGAGCGCTCCCTCGTCGCACAGGAGGAGCGCGAGGACGTCCCGTTCGAGAACTTCGTCCGGTCGGTCTCGTCGCTCGCCGATCACCTCGAGGAGCAGCTCCGCTTCGCCACTGAGGATCCAGCGGCCCGGCGGATCGGCGCCGAGATCATCGGCAACCTCGACGAGGACGGGTACCTCCGGGCGGAGCTCGGGGAGATCGCCCCGCGGTGCGCCGCGACGCCCGAGGAGGTCGAGCGCGTCCTGACCGAGGTGGTCCAGAAGTTCGACCCGATCGGCGTCGGAGCGCGCACGATTCAGGAGTGCCTCCTGCTCCAACTCCGGTCGAACCCGCCCGTCGACCCGGTGTCCGTCGAGATCATCGAGCGGTACTTTGAGGACCTCAGCCGCCGCCGCTATCAGGACATCGCGCGGGCGCTGAAGCTGCCGGCCGACCGGATCATGGAGTCGGTCGAGGAGATCATGGGGCTCGAGCCCAAGCCCGGCCGTCGCTTCGCCGGGAACGACTCGCGCTACATCGTGCCGGATGTCTACGTCATCAAGGTCAGCGGCGACTACACGGTCGTGCTGAACGAGGAGGGCATCCCGCGCCTCCGCGTGAACGCGCTCTACCGCTCGCTGCTCCGGAGCTCGGGCGACGAGGCCCGCCAGTACGTCGAGCAGAAGCTCCGCTCCGCCCTCTGGCTGATCAAGTCGGTCGACCAGCGGCAGCGCACCCTCCGCAAGGTCACCCAGTCCATCGTGAAGTTCCAGCGCGAATTCCTCGACAAGGGGCTGCCGTACCTCAGGCCGCTGTCGCTCCGGGACGTCGGCGAAGACATCAGCATGCACGAATCCACGATCAGCCGCGTGACGACGAACAAGTACGTCGAGACGCCCCAGGGGCTGTTCGAGCTCAAGTTCTTCTTCCACAGCGGCATCGCCTCGGGCGACGGCGAGATGGTCTCCTCGGTCTCCGTGAAGAAGATGATCCAGGACCTCCTGGCGAATGAGGACGCCGTCAAGCCTCTGTCCGACCAGGAGGTGGCCGGGATCCTCAAAGGCCGCGGCCTCACGATCGCCAGGCGCACCGTCGCGAAGTATCGGGAGGAGCTCGGCATCGTGCCCTCGCACCAGCGCAGGCTCCAGCCGCGCAAGCGGTGA
PROTEIN sequence
Length: 488
MAIEARLSLRQSQRLVMTPLLQQAIQLLQLSTLELQDVVQKELLENPLLEEVPADGGETPDGGEVAPSAEATPAPTVEPITTDPPPTAERQTDDLPFDPIAVLFDEPEERSLVAQEEREDVPFENFVRSVSSLADHLEEQLRFATEDPAARRIGAEIIGNLDEDGYLRAELGEIAPRCAATPEEVERVLTEVVQKFDPIGVGARTIQECLLLQLRSNPPVDPVSVEIIERYFEDLSRRRYQDIARALKLPADRIMESVEEIMGLEPKPGRRFAGNDSRYIVPDVYVIKVSGDYTVVLNEEGIPRLRVNALYRSLLRSSGDEARQYVEQKLRSALWLIKSVDQRQRTLRKVTQSIVKFQREFLDKGLPYLRPLSLRDVGEDISMHESTISRVTTNKYVETPQGLFELKFFFHSGIASGDGEMVSSVSVKKMIQDLLANEDAVKPLSDQEVAGILKGRGLTIARRTVAKYREELGIVPSHQRRLQPRKR*