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13_1_40cm_scaffold_18761_3

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: comp(1267..2154)

Top 3 Functional Annotations

Value Algorithm Source
rluD_3; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 276.0
  • Bit_score: 417
  • Evalue 1.40e-113
RNA pseudouridylate synthase id=1890952 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 277.0
  • Bit_score: 417
  • Evalue 9.90e-114
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 293.0
  • Bit_score: 198
  • Evalue 3.50e-48

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 888
GTGGGTCCCCAACCCGCCCCCACCGCCTCCGCCGCCCAGTCACTGAGCGCATCGTCCCGCGAACCGGACGTGACGCTCGGGGAGCGGCTGCGCGCCATCTACCCGGGCACGCCCGGCCGCCGGCTCAAGCAGTGGCTCGCGGGCGCACGCGTTCGCGTCAACGGCGCCGTCGTGTTCCGCGGCGACGTCACGGTGGGACCGGACGACCGCGTCGAGCTCGGCTCATCGCCGCCCGCCGGCTTCCCCGCGCCGCTCCGCCTCGTGCACGAGGACGACCACCTCGTCGTCGTCGACAAGCCCGCAGGGCTCCTGACGATCGCGACCGAAACCGAGCGTGAGCGCACCGCGTACCGCCTGCTCGGCGACTGGGTGCGGGCACGGGGAGGCGGGCGGATCTTCGTCGTCCATCGGCTCGACCGTGAGACCTCCGGTCTGCTCGTCTTCGCCAGGTCGCTCGCGGTGAAGCAGGCGCTCCAGGCGCAGTTTCGCGGGCGCACGCCCGAGCGTGTCTACGTGGCCCGCGTGGAGGGCGTCGTCCGCGGCCCGGAGGGCACGCTGACCGGGTCCCTCGTCGAGGACCGCGCCCTGCGCGTTCGGCTCGCGCGCGACGGAGGCCGCGGCAAGGAAGCGATCACCCGCTACCGCGTGCTCGAGCGCGCCCGGGGCGCGACGGTGCTCGAGCTTGTGCTCGTGACGGGGCGGCGGGGTCAGCTCCGCGCCCAGCTCGCGGCGCTCGGGCATCCGATCGTCGGCGACCGCGCGTACGGGAGCCGGCGCGACCCGTTGCGACGCGTCTGCCTGCACGCCACGCGACTCGGCTTCGTCCACCCGAGCGGCCGGCGGGTCGTCTTCGAGAGCCCGCCGCCCGCCGGCTTCCGGCGGGCGTAG
PROTEIN sequence
Length: 296
VGPQPAPTASAAQSLSASSREPDVTLGERLRAIYPGTPGRRLKQWLAGARVRVNGAVVFRGDVTVGPDDRVELGSSPPAGFPAPLRLVHEDDHLVVVDKPAGLLTIATETERERTAYRLLGDWVRARGGGRIFVVHRLDRETSGLLVFARSLAVKQALQAQFRGRTPERVYVARVEGVVRGPEGTLTGSLVEDRALRVRLARDGGRGKEAITRYRVLERARGATVLELVLVTGRRGQLRAQLAALGHPIVGDRAYGSRRDPLRRVCLHATRLGFVHPSGRRVVFESPPPAGFRRA*