ggKbase home page

13_1_40cm_scaffold_31928_16

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: 7326..7613

Top 3 Functional Annotations

Value Algorithm Source
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 94.0
  • Bit_score: 151
  • Evalue 4.60e-34
50S ribosomal protein L18 id=4716766 bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 94.0
  • Bit_score: 115
  • Evalue 3.40e-23
rplR; 50S ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 95.0
  • Bit_score: 95
  • Evalue 1.00e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGATCACGAAGGAGCGGCGCGTGGCGCGCGACCTCCGACATCGGCGGGTCCGGCGGTACGTGCGCGGGTCCGCGGCGCGGCCGCGCCTCGCGGTGTTCCGGAGCCTCAACCACATCTACGCTCAGCTCATCGACGACGACGCGGGTCGGACGCTCCTCGCGGTCGACAGCCGGAGCAAGGCGTTTCGGGCCGAGCACCGTGCCGGCGGCAACATCGCCGCGGCGAAGGTGGTCGGCGCGCTCCTCGCGCAGCACGCCAAGGGTCGCGGGATCGAGNNNCTGAGATGA
PROTEIN sequence
Length: 96
MITKERRVARDLRHRRVRRYVRGSAARPRLAVFRSLNHIYAQLIDDDAGRTLLAVDSRSKAFRAEHRAGGNIAAAKVVGALLAQHAKGRGIEXLR*