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13_1_40cm_scaffold_5988_17

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: 15386..15685

Top 3 Functional Annotations

Value Algorithm Source
sigW5; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 100.0
  • Bit_score: 168
  • Evalue 5.00e-39
ECF subfamily RNA polymerase sigma factor id=4751264 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 96.0
  • Bit_score: 153
  • Evalue 1.20e-34
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 87.0
  • Bit_score: 81
  • Evalue 2.10e-13

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 300
GTGGAGACGCGGAAAGCCGACACCGACGCGGGCCTCGTCGAGGCCCTCCGGCGCGAGGACCCAGAGGCGCCCGAGCTGCTCGTGGAGACGTTCGGCGACCGGGTGTACCGCCTCGCGCTGCGCATCACGGGGTCGAACGAGGACGCCGAAGAGGTCGCGCAGGACGCGCTCTGGACGGCGGCGCGCAAGATCCACACGTTCAAGGGCGAGTCGGCGTTCGGCAGCTGGCTCTACCGCATCGCCGCGAACGCGGCCTATCAGAAGCTCCGAGCGCGGAAAGCGAAGGCCCACGAGGTCGCG
PROTEIN sequence
Length: 100
VETRKADTDAGLVEALRREDPEAPELLVETFGDRVYRLALRITGSNEDAEEVAQDALWTAARKIHTFKGESAFGSWLYRIAANAAYQKLRARKAKAHEVA