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13_1_40cm_scaffold_1178_10

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: 7735..8442

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 235.0
  • Bit_score: 387
  • Evalue 1.20e-104
ABC transporter related protein id=3368248 bin=GWA2_Methylomirabilis_73_35 species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 236.0
  • Bit_score: 373
  • Evalue 2.20e-100
high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 239.0
  • Bit_score: 236
  • Evalue 7.00e-60

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGCTCGCGCTCGAGAACGTCCACACGTACTACGGCAAGTCGCACGTCCTCCACGGCGTGTCGATCCGCGTGGAGGCCGGCGAGGTCGTCGGCCTGCTCGGCCGCAACGGCGTGGGCAAGAGCACGACGCTCAAGACCATCATGGGCCTGGTCCGGCCCTCGGCGGGACGCATCAGCTTCGAGGGACAGGACATCACGGGTCTGGCGCCCCACCGGCTAGCCCGCCTGGGGATCGGCTACGTGCCGGAGGACCGCCGGATCTTCCGCCTGCTGACGGTGCTGGAGAACCTCCGCACGGGCCTCGACCGGGCCGAGGTCACCCCTTCGCGCCGCCAGGAGCTCCTGGAAAAAGTCTACGCGAGCTTCCCGGTACTGCGGGAGCGGCGCCACCAGGCGGGCGGCACGCTCTCCGGCGGCGAGCAGCAGATGTTGGCCATCGCCCGGGCCATGATGCTGGAGCCCAAGATCGTCCTGCTGGACGAGCCCACCGAGGGGCTCATGCCGCGCATGGTCGCGCACATCCGCGAGATCATCGACGTCCTGCACCGCGACGCCGTCGCCATCCTCCTCGTGGAGCAGAACGTCCCGCTCACGCTCGCCGTCGCCGGTCGCGTCTACATCATGGAGAAGGGCGCGGTGCGGCACCACGCGACGGCCACCGAGCTCGGGGCCAACGCCGCCGTCATCCACCAGTACCTGGGGGTGTAG
PROTEIN sequence
Length: 236
MLALENVHTYYGKSHVLHGVSIRVEAGEVVGLLGRNGVGKSTTLKTIMGLVRPSAGRISFEGQDITGLAPHRLARLGIGYVPEDRRIFRLLTVLENLRTGLDRAEVTPSRRQELLEKVYASFPVLRERRHQAGGTLSGGEQQMLAIARAMMLEPKIVLLDEPTEGLMPRMVAHIREIIDVLHRDAVAILLVEQNVPLTLAVAGRVYIMEKGAVRHHATATELGANAAVIHQYLGV*