ggKbase home page

13_1_40cm_scaffold_136_26

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: comp(26164..27558)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPLOWO2_12_FULL_Rokubacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 461.0
  • Bit_score: 653
  • Evalue 1.80e-184
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=3503981 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 461.0
  • Bit_score: 649
  • Evalue 2.40e-183
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 464.0
  • Bit_score: 342
  • Evalue 1.80e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGCCTGTCATCACCGTGCAGGAGATCGTTCGGGCGACCCAGGGCGCACTGGTCGTGGGCGACCTCGCCATCCCCGTCAGCGGCGTCTCCATAGACTCTCGCACGCTCGGCGTCGGCGAGGCGTTCTTCGCCATCCGTGGCCATCGTCTCGACGGGCACGCCTTCGTCGTCGAGGCGGCGAGCCGCGGGGCCTCCTGCCTGGTCGTTCACCACGTGCCGGACCCGATCCCGGCCGGCGTCCCGCTGGTTCTGGTCGAGGACACGACCAAGGCCCTGGGGCGCCTGGCAGCGGCGCATCGGGCGAAGTTCGACGTCCCCGCCGTCGCCGTCACCGGCTCGAACGGCAAGACGACGACGAAGGAAATGCTCGCGGCCGTGCTCGGTCAGCGCTGGCGGGTCCTCAAATCCGAGTCGAGCTTCAATAATCAGTGGGGCCTGCCACTGACGCTGCTGCGGCTCGGGCCCGAGCACGAGGCGCTGGTGGTGGAGATCGGAACGAATCAGCGGGGCGAGATCGCCTATCTCAGCGGGCTGACGGCGCCCACCGTCGGCGTCGTCACCACCGTCGCCGCCGTCCACACCGAGTTCCTGGGGTCGCTGGCCGGCGTGCGCGAGGAGAAGGCGGCGCTGGTGCGGGCGCTAGGGGCCGCCGGCTGCGCCGTCCTGAACGCCGACGACGCCCGCGTGATGAGCATGACACGCGAGACCGCCGCCCGCGTCCTCACCTACGGCCGCGCCGCCACCGCGGCGGTCCGCGCCGTCGGCGACGTGGGGGAGGATCCGCGCGGGCTCACGTTCACGCTGGAGGCGGGGGGCGCACGCCAGGCCGTCACCCTGGGCTTCGTCGGCCGTCACAACCTGACGAACGCTCTGGCCGCGGCGGCCGCCGGGGTCGCCCTGGGGTTCTCGCTGCCTGAGATCGCCCGCGGGCTCGAGAGCGCCCGGCCCGTCAAGGGCCGCTGCATCTGGCAGCGGGTCGGCGACGTGAGGATCCTGGACGACACCTACAACGCCAACCCGGCCTCCGTGAAGGCGGCGCTGGAGACCGCGGTGGCGCATCGTGGATCGAGCCGTCTGGTCGTCGTGCTCGGTGACATGCTGGAGCTGGGCGACGTGACGGACGACGCCCATCGCGACGTGGGACGGCAGGTGGTGGCCGCCGGGGCCACGGAGTTCATCGGCCTGGGCGCCCACAGCCGCCTGGCCGTCGAGGCGGCCCGCGAGAGCGGGTTGGCCGAGGCGCATCACGCAATGACGTTCGAGGATACCGTCGCCCACCTGCTCAAGCGCGTGGCGCCGGGCGATCTCGTCCTCGTCAAGGGCTCGCGCGGGATGCGCATGGAGCGGGTGGCCGATGCGCTCGCCGCGCGACTGGCCAGGCCCGAAGGGAAATGA
PROTEIN sequence
Length: 465
MPVITVQEIVRATQGALVVGDLAIPVSGVSIDSRTLGVGEAFFAIRGHRLDGHAFVVEAASRGASCLVVHHVPDPIPAGVPLVLVEDTTKALGRLAAAHRAKFDVPAVAVTGSNGKTTTKEMLAAVLGQRWRVLKSESSFNNQWGLPLTLLRLGPEHEALVVEIGTNQRGEIAYLSGLTAPTVGVVTTVAAVHTEFLGSLAGVREEKAALVRALGAAGCAVLNADDARVMSMTRETAARVLTYGRAATAAVRAVGDVGEDPRGLTFTLEAGGARQAVTLGFVGRHNLTNALAAAAAGVALGFSLPEIARGLESARPVKGRCIWQRVGDVRILDDTYNANPASVKAALETAVAHRGSSRLVVVLGDMLELGDVTDDAHRDVGRQVVAAGATEFIGLGAHSRLAVEAARESGLAEAHHAMTFEDTVAHLLKRVAPGDLVLVKGSRGMRMERVADALAARLARPEGK*