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13_1_40cm_scaffold_164_20

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: comp(14338..14919)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XV65_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 181.0
  • Bit_score: 128
  • Evalue 6.00e-27
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHO40571.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 181.0
  • Bit_score: 128
  • Evalue 8.40e-27
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 184.0
  • Bit_score: 127
  • Evalue 4.90e-27

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Taxonomy

Caldithrix abyssi → Caldithrix → Bacteria

Sequences

DNA sequence
Length: 582
GTGGACAGAGGATCCGAGTTTCAAGACCTTGTCCCTAAGTATCTCAATTCCCTGTACAACTACGCCCTCGTCCTCACGCGGCGGGCCGAGGATGCGGAGGACCTGCTCCAGGAGAGCCTCGTTCGCGCCTACGACGGCCTTCATACCTTCGATCGGTCGCTCAGCTTCAAGCCGTGGATCTTCACGATCATGAGGAATGTCCAGATCGACCGGCAACGGCGGCGGCGGCGGCAGCCCTCGGAAAGGCCGCTGAGGGATGAGGAGGAAGCGGAGCCGGTGGTGTCGATGGAAAACCCCCTGTGCTCTATCCCGCTCGCCCCCGAGGACATCCTCGTTCGTCGCGAGACGGTCGAGCGGGTTCGGGAAGCGATCCGCCACCTGCCCCCTGTGCTCAGGGAAATCGTCGAGCTTCGCGACATCGAGGGTCTCTCCTATCGCGACATAGCGACGATCGTCAGCCGCCCGGTCGGGACGGTCATGTCGCGACTCTATCGCGGCAGGAACTTGCTCCGGACCTATCTCGTGGAGCCCGCCCAGCGGCCCGGCGAGAACAGGATTGGCGTGCGGAATGATGGACTGTGA
PROTEIN sequence
Length: 194
VDRGSEFQDLVPKYLNSLYNYALVLTRRAEDAEDLLQESLVRAYDGLHTFDRSLSFKPWIFTIMRNVQIDRQRRRRRQPSERPLRDEEEAEPVVSMENPLCSIPLAPEDILVRRETVERVREAIRHLPPVLREIVELRDIEGLSYRDIATIVSRPVGTVMSRLYRGRNLLRTYLVEPAQRPGENRIGVRNDGL*