ggKbase home page

13_1_40cm_scaffold_1371_8

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(6901..9072)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein id=4819248 bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 724.0
  • Bit_score: 641
  • Evalue 1.30e-180
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 723.0
  • Bit_score: 641
  • Evalue 1.90e-180
TPR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 641.0
  • Bit_score: 272
  • Evalue 4.60e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2172
ATGGGGCGAGTGAAGCTCTCGGTGGTGGTGCTGACGATCCTGGCCTCGGCATTTCTCGGCGCTTGCGCCGAGACTCCGGACGCAAAGCGGGCGCGACACCTCAGTCGCGGCGACGAGTATTTCGGGCAGGGCCGGTACAAGGAATCGCTGATCGAGTACCAGAACGTCCTGCGCTTCAACGCGAGCGACTCACGGGCGATCGAGCGGATGGGCTTCGCCTACCACAATCTCGGTGATTTCCGGCGCGCCTATCCCTTCCTCCTCAAGGCTCGTCAGGCCAACCCCGACGACGTGAACGTCACCATGAAGCTGGCCGCGATCTACCTGCTGGCCGGCAAGCTGGACGAGGCGCGAGAGCTCGCCGGAAGCGTCCTGGAAAAGGACCCCAACAGCCTGGAGGCGCTCCAGGTCGTGGCCGTCGCGGCGCGCCGGCAGAACGAGATCGCGGAGGCGGCCGCCGGCTTCGAGGCAGCCCGACCCGCCCTCGAGGCCCGCGCCGGGTACCACCTCAGCCTCGCCGAGCTGTCGATGAAGACGCGCGATTTCGACAAGGCCGAGGGGCAGCTCAAGGACGCGCTCGAGCGCGACACCAAGTCGGTGCAGGCGCACCTCATGCTGGCCAACGTGTATCGCGCCAAGGGCGACCGCGACGCCGCCCTGCGCGAGCTCAAGACGGCCGTGGCCGTCGAGCCGGTGGCCGGGGGAGCGCGGTTGCACCTCGTCGACTTCTACGCCGGGAGCAACGACTACGCGAAGGCCAAGGAAGTGCTCAGCTCGGCGAAGGAAGGTGACGGCGATTACCTGGCGGCCCGGCGTCGCCTGGCCGAGCTCGCCTTCATCGAGGGCAAGGCCGAGGAGAGCCTCGCCATCCTCGGCGACATCTTCAAGAAGGCGCCGTCGGATGTCGAGGGACACCTGATTCGCGGCCGCATCTACCTCACCAAGCGGCAGACGACGGAGGCGATCCAGGACTTCCAGAGCGTGCTGAAGGCCGACTCCAAGCAGGCGCAGGCCCGGTACTGGCTCGCGATCGCCTACCACCAGACGGGCAACATCCAGCAGGCCAAGACCGAGCTGGCCCAGGCGCTGGAGCTGGCGCCCCGCATGACGGACGCGGCGCTGCTCCTCGCCCAGATGAATATCGAGTCCACCAATCCGGCGGCGGCCATCGAGTCGATGGAGAAGATCATCGCGGCGCAGCCGAGAGTCCTCCAGGCCTATGTGCTGCTCGGCACGGCGCAGCTCAGTCGGCGTCAGCCGGAGGCCGCGGTGCAGACGTTCCGGAAAATGCAGGCCGTCGCGCCCAAGGACCCGCGGGCCGTTCATCTGACCGGCGTCGCGTTGCAGGCGATCGGCCACAAGGCCGAGGCCACGCGTGAGTTCGAGCGGGCCCTCAGCATGAAGCCGACGTTCGCCGACCCGCTGACCGCGCTGGTGGGACAGGCGATCGGCGAAGGCCACACGGGGGTGGCGCTGGAGCGGGTTCGCAAGCAGATCAGCGTCGCCGGCAACTCGGCCCGCCTGCAATTCCTGCTGGGCTCCACGCATCAGCTACGCAAGGAGACGCAGCAGGCGGAGGCGGCCTATACGAAGGCGCTCGAGCTGGATCAGGCGTTCGTTCCCGCCTACGTGTCTCTCGGCCAGATGTACCTGTCCGCCCAGGACGACCAGAAGGCGCTGGCGCGGTTCGAGCAAGCACTCGCCGTCAACCCCAACGACGTCATCTCTCGCATGATGTCCGCCCAGATCCATCTGAACCGCGGTGACTCGGCCAAGGCCCGGGCGGCCTACGAGCACATCCTGGCCGCCAAGCCCCGCTTCGTGCCCGCCGCCAACAACCTGGCGTGGATGATGGCGCAGGCCGGCGACAAGGAGCGTGCGCTCCAGCTCGCTCAGATCGCGAAGGAAGGCGCGCCCGACGATCCGTTCGTCTCCGACACGCTCGGGTGGATCCTCCACCAGCGCGGTGTCCACGAGCGGGCCTGGACCCTGATCAAGGAGAGCGCGGCCAAACAGCCGGGCAATCCCGAGATCCAGTACCACGCCGGCGTCCTCGCCCAGAAGATGGGGCAGCCGGAGCTCGCCAAGGAGCACTTCCAGCGTGTCGTGTCGGCAGGCGGCAACTATCCCGGCAAGGAAAAAGCCGTGAAGGCACTGACGGAGCTCAAGTAA
PROTEIN sequence
Length: 724
MGRVKLSVVVLTILASAFLGACAETPDAKRARHLSRGDEYFGQGRYKESLIEYQNVLRFNASDSRAIERMGFAYHNLGDFRRAYPFLLKARQANPDDVNVTMKLAAIYLLAGKLDEARELAGSVLEKDPNSLEALQVVAVAARRQNEIAEAAAGFEAARPALEARAGYHLSLAELSMKTRDFDKAEGQLKDALERDTKSVQAHLMLANVYRAKGDRDAALRELKTAVAVEPVAGGARLHLVDFYAGSNDYAKAKEVLSSAKEGDGDYLAARRRLAELAFIEGKAEESLAILGDIFKKAPSDVEGHLIRGRIYLTKRQTTEAIQDFQSVLKADSKQAQARYWLAIAYHQTGNIQQAKTELAQALELAPRMTDAALLLAQMNIESTNPAAAIESMEKIIAAQPRVLQAYVLLGTAQLSRRQPEAAVQTFRKMQAVAPKDPRAVHLTGVALQAIGHKAEATREFERALSMKPTFADPLTALVGQAIGEGHTGVALERVRKQISVAGNSARLQFLLGSTHQLRKETQQAEAAYTKALELDQAFVPAYVSLGQMYLSAQDDQKALARFEQALAVNPNDVISRMMSAQIHLNRGDSAKARAAYEHILAAKPRFVPAANNLAWMMAQAGDKERALQLAQIAKEGAPDDPFVSDTLGWILHQRGVHERAWTLIKESAAKQPGNPEIQYHAGVLAQKMGQPELAKEHFQRVVSAGGNYPGKEKAVKALTELK*