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13_1_40cm_scaffold_1444_7

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(4132..4416)

Top 3 Functional Annotations

Value Algorithm Source
histone family protein DNA-binding protein; K04764 integration host factor subunit alpha Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 90.0
  • Bit_score: 171
  • Evalue 4.20e-40
Integration host factor, alpha subunit id=4853973 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 89.0
  • Bit_score: 167
  • Evalue 7.40e-39
integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 93.0
  • Bit_score: 102
  • Evalue 4.80e-20

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 285
GTGACCAAGAACGACCTGATCAACGCCGTCGCCAATCACGGACTGTCCAAGCGGCAATCAGCGTCCGTCGTCGAGTCGGTGTTCGACATCATCTTCCGGTGCTTCGAGAAGACCGAAGACGTGAAGATCGTCGGATTCGGCCACTTCCGCATCCGGCGCAAGGCGTCGCGGCGGGGACGCAATCCTCAGACGGGCGATTCCATCGAGATCACCGCCCGTAAGGTGCTCACGTTCAAGCCGTCGAAGGGGCTCAAGCAACGGATCAACAGCACGCAGCCGAGCTGA
PROTEIN sequence
Length: 95
VTKNDLINAVANHGLSKRQSASVVESVFDIIFRCFEKTEDVKIVGFGHFRIRRKASRRGRNPQTGDSIEITARKVLTFKPSKGLKQRINSTQPS*