ggKbase home page

13_1_40cm_scaffold_2485_18

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 18316..18972

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 218.0
  • Bit_score: 284
  • Evalue 1.00e-73
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 222.0
  • Bit_score: 180
  • Evalue 5.50e-43
Pseudouridylate synthase I id=4703404 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 218.0
  • Bit_score: 279
  • Evalue 2.40e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 657
GTGCAGGGGCATCTGATCGACGCCGCCCGACAGCTCCTGGGGCCGGACACGCGTGTCGTTGGTGCCAGCCGCACCGACGCCGGCGTCCACGCGCTCGGTCAGGTGGCGTCGCTCACGACGGAGAGCGCGTTGCCCGCCACGGCGGTGTTGGGAGCGCTGAACGCCACGCTGCCCGCCGACATCCGGGTTCTGGACGTCAGGGACGCGCCCGCGCAGTTCCACGCCCGCCGCCACGCCACGAGAAAACGCTACGCCTACCTCATCGACAACGGCGCGGTGGCGAGTCCGCTGCTGCGACGCTACGCCTGGCACGTACCGGTCACGCTCGACGTCGGCGGCATGCGGGCCGGACTCGGGCTCCTGCGCGGCTCTCACGACTTCAGCGCGTTCCGCGCGGCGCCGGGGAAGAGCCAGCGCCCGGTGTGCCACGTGAGCGCAGTGCACGTGGTCCAGCGCCGGTCTCGTGTGGCCATCGTCGTGTCCGCCGACCGCTACCTGCACCACATGGTGCGGAACATCGTGGGCAGCGCGGTGGCCATCGGCCGGGGAACGCATGGCCCGGCCTGGATGGGCGATGTGCTCGCCAGTCGGGATCGCAGGAAAGCCGGCGTGACGGCGCCTGCCCAGGGGCTGACGCTGCTGCGCGTCGTGTACTGA
PROTEIN sequence
Length: 219
VQGHLIDAARQLLGPDTRVVGASRTDAGVHALGQVASLTTESALPATAVLGALNATLPADIRVLDVRDAPAQFHARRHATRKRYAYLIDNGAVASPLLRRYAWHVPVTLDVGGMRAGLGLLRGSHDFSAFRAAPGKSQRPVCHVSAVHVVQRRSRVAIVVSADRYLHHMVRNIVGSAVAIGRGTHGPAWMGDVLASRDRRKAGVTAPAQGLTLLRVVY*