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13_1_40cm_scaffold_2869_8

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(6077..7126)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 338.0
  • Bit_score: 502
  • Evalue 3.90e-139
RNA polymerase sigma-E factor id=1709623 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 339.0
  • Bit_score: 495
  • Evalue 5.70e-137
RNA polymerase sigma-e factor similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 198.0
  • Bit_score: 163
  • Evalue 1.50e-37

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1050
GTGGCCAACGAACGCCCCGTGGATACCGACGACCAGGCGCTGGTTGAACGTTGCAGGAACGGCGATGTCGCTGCCTTCGAGTCGCTCGTGGAGAAGTATCGCGAGAGGGTGTGGCGGCTTGCCTACAACTATTTGCGCGACCGCGAGGAAGCCTGGGACGTCGCGCAGGACGCGTTCATCCGGGCCTGGCAGGCGCTGCCATCGTTCCGCGGCCAGTCGGCGTTCTACACGTGGCTGTTCCGGATCGTGATCAACGTGGCCACCGACCGTGCGCGGCAGCGGTCGGCCCGGGGCCGGGCCTTCGGGACCGAGGCGGTGCCCGAGGAAGAGTGGGACCGCGTCCTGGTGGAGCCGGGTGGTGGCCCCGACGCCGCTGCCTCGCGAGCGGAGCAGCGCGAGCGCATTCGGCGTGGCCTCGACGCGTTGCCGGAGCATCACCGCGCGATTATCATGTTGAGCGATCTCGAAGGTCTCTCGTACCGCGAGATCGCCGAGGTGCTCGACATTCCGATGGGTACGGTCATGTCCCGACTGCATAACGCGCGGAAGCGTCTGCGCGATATCCTCGGACGGGTCCTGGTCGTGATCCTCGCCCTCGGCTTCTTGACCGTGCCCGTCACCAGCCAGGCCCAGCAGGTCGTACGGTTCGGGACGCGCGTCCTCCTCGCCACCGACGGCCCACCATCGCCGGCCATGCGGGTGGCGCCTCCCGAGCCCGATGAGCGGCTCGCGCAGTTCCTTCCCCGTCTGCGCCAGCTCTTCCGCTACAAGGAGTACACGTCGCTCGAGCGGTATCGGGCCGAAGTGCCGGTCGGGGCGACGCAACGCTGGCCGGTTCCCGGGGAGCGCCAGCTCGAGGTCACGCCGGAGGGCGTGAACGGCAACACGGTGCGGCTGCGCGTGCGACTGGAACGTGGTGGTCGCGCGGAGGTGAACACCAACATCCAGGCGGCGTCCGGAAATCCCGCCGTCATCGGCGGCCCCAAGCATGCCGACGGTGTCCTGATCATCGTCGTGTGGGCCAACGCCAACCCGACCCGGCGACCGTGA
PROTEIN sequence
Length: 350
VANERPVDTDDQALVERCRNGDVAAFESLVEKYRERVWRLAYNYLRDREEAWDVAQDAFIRAWQALPSFRGQSAFYTWLFRIVINVATDRARQRSARGRAFGTEAVPEEEWDRVLVEPGGGPDAAASRAEQRERIRRGLDALPEHHRAIIMLSDLEGLSYREIAEVLDIPMGTVMSRLHNARKRLRDILGRVLVVILALGFLTVPVTSQAQQVVRFGTRVLLATDGPPSPAMRVAPPEPDERLAQFLPRLRQLFRYKEYTSLERYRAEVPVGATQRWPVPGERQLEVTPEGVNGNTVRLRVRLERGGRAEVNTNIQAASGNPAVIGGPKHADGVLIIVVWANANPTRRP*