ggKbase home page

13_1_40cm_scaffold_3566_6

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 4507..4719

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega id=3315419 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 72.0
  • Bit_score: 118
  • Evalue 3.00e-24
DNA-directed RNA polymerase subunit omega Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 68.0
  • Bit_score: 118
  • Evalue 3.10e-24
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 66.0
  • Bit_score: 66
  • Evalue 2.90e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGTCATTTCCCTCACTGGAGAACGCGCTGAACAAGGTCTCGAACCGCTACCTGCTCGTCGTGCTGTCGGCCAAGCGCGCACGCCAGATCAACCGCGGCGCGCCGGCCCGGGTGGAATCCAAGCAGAAGAAGCCGACCAGCGTGGCGCTGGAAGAGATCTCGCAGGCGAAGGTCGAATACCGGGTGAAGGAGGAGGGAGAGACCAAGGCCTGA
PROTEIN sequence
Length: 71
MSFPSLENALNKVSNRYLLVVLSAKRARQINRGAPARVESKQKKPTSVALEEISQAKVEYRVKEEGETKA*