ggKbase home page

13_1_40cm_scaffold_6111_7

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(4984..6234)

Top 3 Functional Annotations

Value Algorithm Source
lysA; diaminopimelate decarboxylase (EC:4.1.1.20) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 416.0
  • Bit_score: 635
  • Evalue 5.90e-179
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] id=14627103 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 414.0
  • Bit_score: 599
  • Evalue 3.40e-168
lysA; diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 415.0
  • Bit_score: 503
  • Evalue 7.10e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1251
ATGGACCACTTCACCTACAAGAACGCCGAGCTTCATTGCGAGTCCGTCCCGCTCCGCGCGGTTGCCGACGCGGTCGGAACGCCGAGCTACATCTATTCCCGGGCTGCCCTCCTTCAAAGCTATGGTGCCTACGACCGCGCCTTCGCCAGCGTACCCCACGTCGTCTGCTACGCGGTAAAGGCCAACTCGAACCTGGGCGTGCTGGCCACCCTCGCCCGTGCCGGGGCCGGCGCCGACATCGTGAGCGGTGGCGAGCTGTTCCGCGCGCTGCGCGCCGGCGTGCCGCCGAAGAAGATCATCTTCTCGGGGGTGGGAAAGACGCGCGAGGAGATGCGCGACGCGCTGAAGGCCGACATCCTCATGTTCAACGTGGAGTCGGTCAGCGAGCTGCGCGCGCTCGACGACGTGGCGCGCGAGATGGGCGTGCGGGCGCCGGTGGCCCTGCGCGTGAATCCCGACGTGGATCCGCAGACCCATCCCTACATCTCCACCGGCCTGAAGACGTCCAAGTTCGGCGTTCCCATCGCGGAGGCGCTGGCGGTCTACGACGAGGCGGCCCGGCTCACGGGCGTGGAAGTAGTCGGCGTCCAGATGCACATCGGATCGCAGCTCACGAAGACGTCGCCGTTCGCCGACGCCGGCGCGCGGATCGCCGCGCTGGCCAAGACGCTGCGCGAGCGTGGCATCACGATTCAGTGGCTGGACGTCGGGGGCGGTCTCGGCATCCGCTATCGTGACGAGGCGCCGCCGCGTCACGAGGATTACGCCGGCGTGCTGGTGCCGATGGCGCGCGAGCTCGGAGTCACCGTGCTGATCGAGCCCGGCCGCTCCATCGTCGGCAACGCCGGCGTTCTCCTGACGCGCGTGCTCTACCGCAAGGCGACGCCGGCCAAGCGCTTCGTCGTCGTCGACGCCGCCATGAACGACCTCATCCGGCCGTCGTTCTACGACGCGTACCACGAGATCCGTCCCCTGGACGCCGCCCGGACGACGGCGCCGACCGAAACGGTCGACGTGGTGGGACCGATCTGCGAGTCCAGCGATTTCCTGGCCCAGGACCGCGTGCTCCCGACGATGGAGGAGGGTGACCTGCTTGCCCTCATGAGCGCCGGCGCCTACGGCTTTGCCATGGCGTCGAACTACAACACGCGGCCGCGAGCCGCCGAGGTGCTGGTGGACGGGGCGGGCTACACGATTGTGCGCCGCCGGGAGACGTACGAAGACCTGGTGGCGGGGGAGACGATGGTATGA
PROTEIN sequence
Length: 417
MDHFTYKNAELHCESVPLRAVADAVGTPSYIYSRAALLQSYGAYDRAFASVPHVVCYAVKANSNLGVLATLARAGAGADIVSGGELFRALRAGVPPKKIIFSGVGKTREEMRDALKADILMFNVESVSELRALDDVAREMGVRAPVALRVNPDVDPQTHPYISTGLKTSKFGVPIAEALAVYDEAARLTGVEVVGVQMHIGSQLTKTSPFADAGARIAALAKTLRERGITIQWLDVGGGLGIRYRDEAPPRHEDYAGVLVPMARELGVTVLIEPGRSIVGNAGVLLTRVLYRKATPAKRFVVVDAAMNDLIRPSFYDAYHEIRPLDAARTTAPTETVDVVGPICESSDFLAQDRVLPTMEEGDLLALMSAGAYGFAMASNYNTRPRAAEVLVDGAGYTIVRRRETYEDLVAGETMV*