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13_1_40cm_scaffold_634_17

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(22581..23120)

Top 3 Functional Annotations

Value Algorithm Source
Electron transport protein SCO1/SenC n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y593_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 162.0
  • Bit_score: 117
  • Evalue 1.70e-23
electron transport protein SCO1/SenC similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 162.0
  • Bit_score: 117
  • Evalue 4.70e-24
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ACB32323.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptot similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 162.0
  • Bit_score: 117
  • Evalue 2.30e-23

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Notes

cytochrome biosynthesis Cristina Butterfield (6/1/15)

Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCGGCGCCTGGCGCTGCTCGCCGCGCCGGCGATGCTGGTGTCGGCGTGCACGGCGGCCGCGCCGGTTTTGCCGACATTCACGCTGACGAACCAGTCCGGCCAGCTCGTCCGCACCGCCGACCTCCGCGGGACGGCGGCGGTCGTCAACTTCATCTTCACGACCTGCGGCGACGTCTGCCCGCTCGTCACCGCCCAGCTCGTTCGCGTTCAGGCTCGCCTCTTCAACGAAGGCCTCGGGGCTCGCGTGAGGTTCGTCTCGATCACCGTCGATCCCGCCATCGATACGCCGCCGACGCTCCAGCGCTACGCCGCCGTCTACGGCGCCAACCTCGCAACGTGGCATTTCCTGACAGGGCCCGCCTCCGACATCGACCGGTTGACGCGCGAGGTCGGTGTCCTCACCGGAACGGCCGGCCGGATCGGTCACACGAACCTGCTGCTCTTCGTCGACACCCAGGGACGGATTGCGGCGCGTGAAACTTCGGTGGAGCTCGATCCGGAGTTCGTGCTGCCGAAGATTCGCCGACTGCTCGGCTGA
PROTEIN sequence
Length: 180
MRRLALLAAPAMLVSACTAAAPVLPTFTLTNQSGQLVRTADLRGTAAVVNFIFTTCGDVCPLVTAQLVRVQARLFNEGLGARVRFVSITVDPAIDTPPTLQRYAAVYGANLATWHFLTGPASDIDRLTREVGVLTGTAGRIGHTNLLLFVDTQGRIAARETSVELDPEFVLPKIRRLLG*