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13_1_40cm_scaffold_628_8

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 7309..8202

Top 3 Functional Annotations

Value Algorithm Source
dihydrouridine synthase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 297.0
  • Bit_score: 453
  • Evalue 3.00e-124
tRNA-dihydrouridine synthase id=3938344 bin=GWF2_Methylomirabilis_70_14 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 301.0
  • Bit_score: 353
  • Evalue 2.30e-94
nifR3 family TIM-barrel protein similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 301.0
  • Bit_score: 262
  • Evalue 1.50e-67

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGATCTGCGGCTCGCTCCGATGGCCGGGGTCACCAACGCGCCGTTCCGCCTCGTCTGCCGCGAGGCTGGCGCCGGGCTCCTCACCAGCGAAGAGATCGACGCCCGCGCCCTCGTCGAGGGCAACGCGCGCACCCAGCTGATTGCCCGCTACCTGCCCGAGGAGCGCCCCATCGCCTTCCAGCTCCTCGGCGGGGATCCCGACGTGCTGGCCGAGGCCGCGCGACGATTGGAGGCCGCCGGCGCCGACGCCATCGACCTCAACATGGGCTGTCCCGTCGCGAAGATCGTGGCCAAGGGACAGGGCGCGGCGCTCATGCGCGATCCGCTGCGCGCGGCCGTCGTCTTGCGCACGCTGCGGAAGGCCGTCGACGTGCCGTTCACCATCAAGATTCGCTCAGGCTGGGACGAGCGCACGGTGAACGCAGTGGAGATCGCGCGCATCGCCGAGGGCGAGGGGGTGGACGCGATCACGGTCCATCCCCGCACGCGCTCGCAGCAGTACACCGGGCACGCGCCGTGGGCCGTCATCCACGAGGTGGTGGCCGCTGTGAGCGTGCCGGTGGTCGGCAACGGCGACGTGAGGAGCCACGCCGACGCGTGTGATCTGATCGCGGCGACCGGCTGCGCGGCGGTGATGATCGGCCGGGGCGCGCTGGGCGCGCCGTGGATCTTCACCGGCGAGTCGGTGGATCGCGACGCGCGCGCGGCCATCATTCGCCGGCATTGCGCCCTGATCGAGGCCCATCTGCCGCCACGCGATGCCCTGGTCCAGGTCAAGAAGCACCTCGCGTGGTACTCGGCGGGACTGGCGGGCAGCGCGCGACTGCGCACCGCGCTCTTCCAGGCCGACGCCGCCGCTGCGGTTCAGGAGATCTTCTGGGGCAGCTGGTGA
PROTEIN sequence
Length: 298
MDLRLAPMAGVTNAPFRLVCREAGAGLLTSEEIDARALVEGNARTQLIARYLPEERPIAFQLLGGDPDVLAEAARRLEAAGADAIDLNMGCPVAKIVAKGQGAALMRDPLRAAVVLRTLRKAVDVPFTIKIRSGWDERTVNAVEIARIAEGEGVDAITVHPRTRSQQYTGHAPWAVIHEVVAAVSVPVVGNGDVRSHADACDLIAATGCAAVMIGRGALGAPWIFTGESVDRDARAAIIRRHCALIEAHLPPRDALVQVKKHLAWYSAGLAGSARLRTALFQADAAAAVQEIFWGSW*