ggKbase home page

13_1_40cm_scaffold_862_1

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 2..1399

Top 3 Functional Annotations

Value Algorithm Source
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 457.0
  • Bit_score: 560
  • Evalue 2.70e-156
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 403.0
  • Bit_score: 504
  • Evalue 9.70e-140
h16_A2949; ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 503.0
  • Bit_score: 236
  • Evalue 1.40e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1398
ACGGCGCCGGCCACCGCCGCCCCCGAGGGCCAGCTCACCTACGCGCTCCACGTCAGCCTCGTCACGCGCTGGCTGGACCCGGGCGACCTCGAGGGGCTGATCACGCCGTTCTTCGTCTTCTACGCGCTGCACGACGCGATGGTGAAGTCGATGCCCGGACAGCTGCTGGCCCCGAGCCTGGCCGAGTCGTGGACCATCTCGAAGGACGGCACCGTGGTCGATTTCGCGCTGCGAAAGGGCGTCACCTTCCACAACGGCGACCCGTTCACCGCCGAGGACGTGCAGTTCAGCTTCCAGCGCTACAAGGGCTCGTCGGCCAAGCTCCTCAAGGAGCGCGTGCGCGAGGTCGAGGTCGTCAACGCCCATCGCGTGCGTTTTCACCTTGCCGGCCCGTGGCCGGACTTCTTCACGGTGTATGGCACGCCGGCCTCGGCCGCCGGCTGGATCGTCCCCAAGCGCTATCTCGAGAAGGTCGGCGACGCCGGCTTCCTGAAGGCGCCGGTGGGCCTGGGGCCGTACCGGTTCGTGTCGTTCAAGCCCGGTGTGGAGCTGGTGCTGGAGGCCAACGAGACGTACTGGCGAAAGGTCCCGAGCGTCAAGCGGCTGGTGATGAAGGTCGTGCCCGACGAATCGACGCGGCTGGCGATGCTGAAGCGGCGCGAAGCCGACGTCGCCTACGCCCTGCTCGGCCCGACCGCGCAAGAAGTCCAGCGCGATTCGAATCTGAAGCTGGTGCCGACCCCGATCGCCGCGAACCACTGGGTCAACTTCCACGACCAGTTCGATCCGAAGTCGCCGTGGCACGATCGCCGCGTGCGGTTGGCCGCCGCCCAGGCGATCGATCGCCACGCCCTCAATCAGGCCGAGACGCTCGGCTTCTCGCGGCTGACGGGCGGAATCGTTCCCAAGGAGTTCGAGTTCTCGCTGCCGCTCGATCCCTACCGGTACGACCTCGCCCAGGCGCGCCAGCTCCTGGCCGAGGCGGGCTATCCGAACGGCTTCGACGCCGGCGAGCTCTCGGTGGGGCCGCCGTACTTCTCGCTCGGGGAAACGATCATCGGTTATCTGCAAGCGGTCGGGATCCGCGCGAGGCTCCGGACGATGGAGCGCGCTGCCTTCTACTCGGCCTGGCGCGACAAGAAGCTCCGCGGCCTCAGCTACGGCGCCAGCGGGGCCCACGGCAACACGGCCACGCGCCTGGAGAGCTTCGTCGTGGGCGGCGCGCCCTACACCAACGGCGGCTATCCCGACATCGATGAGCTGATGCGCGCGCAGGCCCGCGAGCTCGATCGCGGCAAGCGCGAAGAGATGCTCCACCAGGTCCAGCGGCTCGTGTACGAGCGGGCGATGTTCGCGCCGCTGTGGCAGTACACGAAGATCCGCCTGAGGCGTCCGTGA
PROTEIN sequence
Length: 466
TAPATAAPEGQLTYALHVSLVTRWLDPGDLEGLITPFFVFYALHDAMVKSMPGQLLAPSLAESWTISKDGTVVDFALRKGVTFHNGDPFTAEDVQFSFQRYKGSSAKLLKERVREVEVVNAHRVRFHLAGPWPDFFTVYGTPASAAGWIVPKRYLEKVGDAGFLKAPVGLGPYRFVSFKPGVELVLEANETYWRKVPSVKRLVMKVVPDESTRLAMLKRREADVAYALLGPTAQEVQRDSNLKLVPTPIAANHWVNFHDQFDPKSPWHDRRVRLAAAQAIDRHALNQAETLGFSRLTGGIVPKEFEFSLPLDPYRYDLAQARQLLAEAGYPNGFDAGELSVGPPYFSLGETIIGYLQAVGIRARLRTMERAAFYSAWRDKKLRGLSYGASGAHGNTATRLESFVVGGAPYTNGGYPDIDELMRAQARELDRGKREEMLHQVQRLVYERAMFAPLWQYTKIRLRRP*