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13_1_40cm_scaffold_1457_6

Organism: 13_1_40CM_Actinobacteria_66_12

partial RP 21 / 55 BSCG 18 / 51 ASCG 4 / 38
Location: 5641..6198

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LD3_SYMTH similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 169.0
  • Bit_score: 149
  • Evalue 4.10e-33
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 169.0
  • Bit_score: 149
  • Evalue 1.20e-33
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD41513.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 169.0
  • Bit_score: 149
  • Evalue 5.70e-33

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Taxonomy

Symbiobacterium thermophilum → Symbiobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 558
GTGAGCGACCCGCTCCGCGACGAAGAGCGCGAGCTTGTCGAGCGCGCAAAGCGGGATCCCCGTCAGTTCGGGGCGCTCTACGACCGGCACTTTCAGCAGATTTACAGGTTCGTGTATTCAAGAGTGAGGGAGCAAACCGCGGCAGAGGACGTCACTTCGGAGATCTTCATGAAGGCTCTGAAGGCCATGCCCCGATACCAGGACACGGGGCGTCCTTTTGCTGCCTGGCTGTACCAGATTTCGGTCAACGCCATCGCGGATCGGTACCGAACGTTGCGCCCGTCCTCCCCGCTGGAAGACTTCCACGACCTTTCCATCGCCGGCCCGCCGCTCGAGGAGCAGGCCGCTCACCGGGATGAGATCCGCCGGATCTGGGCGCTCGTCGAGGCTCTGCCGGTGCAGCAGAAGACCGCGCTGGTGCTCAAGTTCCAGGAGGACATGAAGATCGAGGACATCGCAGTCGCCATGGGGAAGACCCCGGGCGCCGTCAAGCTCCTCATCCACCGCGGAGTCAGCCGTCTTCGCGACGAGGCCGACAGCTTGAGGCCCGCGGAATGA
PROTEIN sequence
Length: 186
VSDPLRDEERELVERAKRDPRQFGALYDRHFQQIYRFVYSRVREQTAAEDVTSEIFMKALKAMPRYQDTGRPFAAWLYQISVNAIADRYRTLRPSSPLEDFHDLSIAGPPLEEQAAHRDEIRRIWALVEALPVQQKTALVLKFQEDMKIEDIAVAMGKTPGAVKLLIHRGVSRLRDEADSLRPAE*