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13_1_40cm_scaffold_5678_10

Organism: 13_1_40CM_Chloroflexi_68_21

partial RP 17 / 55 BSCG 17 / 51 ASCG 6 / 38
Location: comp(9081..9623)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FMW9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 160.0
  • Bit_score: 119
  • Evalue 4.40e-24
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 147.0
  • Bit_score: 137
  • Evalue 1.70e-29
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 158.0
  • Bit_score: 112
  • Evalue 1.20e-22

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Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 543
ATGGGACCAAGGTCAACCTCGAGATCGACTGACGAGCGCCGTATTAGCGGCGACGACCTCGTCGTCGGGGTCGTGCGCGCGCCTCACGGCGTTCGCGGCGAGGTGAAGGTCCGGTCGCTGACGGATGTCGCGGGCCGCTTCCGGAAGGGCTCCCGCCTTTTCTGCGACGACCTCGAGCTCGTGATCGCATCCGCTCGCGGGACGGAGGACGTCCCGATCGTTCGGTTCGAAGGTCACGCGACGCGCACCGATGCCGAGCGCCTGCGTGGAAAGAGCTTACGCGTGTCGCGCGGCGACGCCCGCCGTGCGGCGAAGGGCAGTTACCTCTGGGCCGATCTTTTGGGCCTCCGCGCCGAAACGCCCGAGGGCGAGGTCCTTGGATCGGTCCGCGAGGTGCTTCGCGCCGGGGAGACCGACGTGCTCGTGATCCGTGTGGAGGGGTCGCGCCCGGATCTCCTCGTTCCGGCGATCGCATCGGTCGTACGTGAGGTCGACGTCCCGCACGGGCGCGTTGTGATCGCACCGCAAGAGGTCCTCGAATGA
PROTEIN sequence
Length: 181
MGPRSTSRSTDERRISGDDLVVGVVRAPHGVRGEVKVRSLTDVAGRFRKGSRLFCDDLELVIASARGTEDVPIVRFEGHATRTDAERLRGKSLRVSRGDARRAAKGSYLWADLLGLRAETPEGEVLGSVREVLRAGETDVLVIRVEGSRPDLLVPAIASVVREVDVPHGRVVIAPQEVLE*