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13_1_40cm_scaffold_5393_11

Organism: 13_1_40CM_Deltaproteobacteria_68_24

partial RP 20 / 55 BSCG 17 / 51 MC: 1 ASCG 5 / 38
Location: comp(10291..10830)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Burkholderia graminis C4D1M RepID=B1FYP4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 180.0
  • Bit_score: 167
  • Evalue 1.10e-38
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 180.0
  • Bit_score: 167
  • Evalue 1.50e-38
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 179.0
  • Bit_score: 165
  • Evalue 1.50e-38

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Taxonomy

Burkholderia graminis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
TTGACCAGTGCCGCGAAATTCGGCGACTTCGAGCGCGCGATCGGGCCGCATATGCGCGCCGCCTACAACCTCGCGCGCTGGTTGGTGCGCGAGTCCGCGGATGCGGAGGATGTGCTCCAGGAGGCTTTCGTGCGGGCATTCCGCTACTTCGACACCTTTCAGGGCGAGAGGGCGCGCAGCTGGCTGCTGGCGATCGTGCGCAACACCTGCTGGTCCTTCATCGCCCGGCGCGGCGAGCATGAGGAACCCTTCGACGATGAGCGCGACTCCGCGACCGTGCTCCCTCTGCAGCTCACACCCGAGCCGGAGGCTCAGCTTCTGCGCGCCGATCAGGCAAAGCGCATCCAGGAGGAAGTCGCTGCGCTGCGGCCCGAATTCCGGGAGGCGTTCATGCTCCGCGAACTGGAAGGCATGTCCTACAAGGAGATCGCGGAGGTCACCGCGGTGCCCATCGGCACGGTGATGTCGCGGCTGTCCCGCGCGCGCCGCGAGCTGCAGGCGAGGCTCGGCGGCACGGCAAGAAAGGCCGGCGTGTCATGA
PROTEIN sequence
Length: 180
LTSAAKFGDFERAIGPHMRAAYNLARWLVRESADAEDVLQEAFVRAFRYFDTFQGERARSWLLAIVRNTCWSFIARRGEHEEPFDDERDSATVLPLQLTPEPEAQLLRADQAKRIQEEVAALRPEFREAFMLRELEGMSYKEIAEVTAVPIGTVMSRLSRARRELQARLGGTARKAGVS*