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13_1_40cm_scaffold_5691_9

Organism: 13_1_40CM_Chloroflexi_67_9

partial RP 16 / 55 BSCG 14 / 51 MC: 1 ASCG 5 / 38 MC: 1
Location: comp(5263..8718)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 994.0
  • Bit_score: 1409
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=14630546 bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 999.99
  • Bit_score: 933
  • Evalue 1.60e-268
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 999.99
  • Bit_score: 886
  • Evalue 1.10e-254

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Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 3456
ATGGTTAGCGCGGTCGACGTTGCGCGCGCTCGCCTCGGGGGCGTGCTTGCTCTGGCCGAGCGCAGCGACGCATATCGAGAGCTCGCATCACGTCTCGAGGATCGGCAGCGCCTCACCGTCGCCGACGCGAACGCGGGCGCGCGCGCCTTCGTGTGGGCGGCGCTCGTCGCGGAGAACGCACGCACGGTCGCACTCGTCGCGCCGAGCGAGGACCGCGCGCGCCGCTGGCGAGCCGAGCTCGCCGGATGGCTCGGCGAAGACCGCGTTCTGGCGTTCCCTGAGCGCGAGACGATGCCCTTCGAAGCCGGAGCCCCATCGGGTACCGCGGTGCATCAGCGGTTGCTCACGCTTTGGCGACTTGCGACCGCGCATGTCCCGGTCGCCGTCGTCACCAGCTTGCGAGCGCTTCTCGAGCACACCATTCCGCCGGATGACCTCGCACGTCGCGGCCGGACGCTACGGGCCGGGGACCGGCTCTCGTGGACGGAGACGGCGGCGTGGCTCTTCGACCTCGGGTACGAGCCGGTCACCGAAGTGAGCGAGCCTGGCACGTTCTCGCGCCGCGGCGGGATCATCGACATCTATCCGGCGTCGGCGGAGCAGCCCGCGCGCGTCGAGCTGTTCGGCGATGAGATCGAAACGCTTCGCGCGTTCGACCCGGTGACCCAGCGCTCGCAGTCGCCGCTCGACGAGCTCGTCGTCCTCCCGGCACGGGAGTTCGCGCTTGAGACCGCGCCGGCCCTGGGAGAACGCCTCGCGCGCGCGGGATGGGATCGGCTGGCGCAAGCGGACGGCGACGAAGGCCCCGACCTCTCGCCGTACGCGCGGCTCCTCGATGCGCTCCGCGAGGGTGGGTACGCCCCGGGCGCCGACGCGCTGGCGCCCTCCCTCGGCGCGACGGCTTCTCTCCTCGACCACCTCGGGGACCGCGCGACGGTGGTGTTCGAGGACACGGTCGAGCTCGATCTCGCGCACGATGCGCTCGAGGCGCAGGCGGAGGAGCGGCGCGACGAGCTCGCCGCGCAGGGCCTGCCGGTCTCGGTCTTCCCCCCGCCGTACGTGCCGCGTTCCCGCATCGACGCGCGAGCGACCGAGCACGGCTCGGCGCGTATGGGCGCTGGACCGAACGCGGTGCGGCTCGGGTGGGCCGGAAGTGCGAGCTACGCGGGCAGGCTGAACGATTTCATCGCCCAGCTGGCCACGCCGCCCGCGGAAGGGATCACGCTGATCGCGACGCCACAGGCGGCGCGCCTCGCGGAGCTCCTCGCCGACCGCGATATCACCGCGGTCGCGCGCGAGACGGTCGCGGACACCCCTCAGCCGGGCTCGCTCGTCGTCGCCCGCGTCCCCCTCGCCGAGGGATTCGTGATACCGGAGCTCGGGCTGCGCGTCTTCACCGACGCCGAGGTCTTCGGGTTCCGCAAGCCGCGCCACCCCGAGCAGCGCCGCAGACGAGTCCAGATCGGCTCGTTCCTCGCCGACCTCAAGCCCGGCGACCACGTGGTGCACGAGGACCACGGCATCGGACGGTTCGAGCGCTTCATCACCCGCGAGGTCGCCGGCGTCGTGCGCGAGTACCTCGAGCTCCAGTTCGCCGGCACCGATGTGGTGTCCCTTCCGACCGAGCGCGTCGACAAGGTGACGCGCTACGTTGGCGGCACCCCCCCGGCCCTCTCCGCGCTCGGTGGGCGCGAGTGGGGCGTCACCAAACGGAGGGCGAAGAAGGCCGCCGAGGAAATCGCGAAGGAGCTCCTCCGCCTCTACGCCGCTCGCGAGGCGACGCAGGGGTTCGCGTTCGGACGCGACAGCCCTTGGCAGATCGAGATGGAGAACGCGTTTCCGTACACGGAAACGCCCGACCAGCTCCAGGCCATCGAGGACACCAAGCGCGACATGGAGCGCGGCCGGCCGATGGATCGCCTCATCGTCGGCGACGTCGGGTACGGCAAGACCGAAGTCGCCCTGCGGGCGGCCTTCAAGGCGGTCCAGGACGGCAAACAGGTCGCGATCGTCGTGCCCACGACCGTCCTGGCGCAGCAGCACTTCGAGACCTTCGCCGAGCGTCTGGCGACGTTCCCGGTGAACGTCGAGATGCTCTCCCGCTTCCGCTCCCCGGCGGAGCAGCGAGCCGTCGCCGAAGGCATCGGCACCGGCGAGGTCGACATCGTCGTCGGCACGCACCGCGTGCTTCAAAAGGACGTGCAGTTCCGCGATCTCGGCCTTGTCGTGATCGACGAGGAGCACCGCTTCGGCGTCAAGCACAAGGAGCGCCTGAAGCAGATGCGCACCGAGGTCGACGTGCTGTCGATGACCGCCACTCCGATCCCGCGGACGCTCCATATGGCCCTCTCCGGTGTGCGCGATATCAGCGTGATCGAGACCCCGACGGAGAATCGACAGCCGATCGAGACCCACGTCGTCGAGCGGAGCGACGACGTGCTGCGCGAGGCGATCGTTCGTGAGGTCGATCGCGGGGGGCAGGTCTACTACGTGCACAACCGCGTGCAGGGCATCGAGCAGGAGGCGCATCGCCTCCGCGAGCTCGTCCCGAGCGCGCGGTACATCGTCGCCCACGGGCAGATGGACGATCGGAGGCTCGAGCGCGTGATGGTCGAGTTCGCGGACGCCGAGCACGACGTCCTCGTGTGCACGACGATCATCGAGTCCGGCCTCGACATCCCCAACGTCAACACGATCGTCATCAACCGCGCCGGCGCTCTCGGACTTGCGCAGCTCTATCAGCTGCGTGGTCGGGTTGGACGCAGCGCCGAGAAGGCCTACGCCTACCTTCTCTATACAAAGGAGCAGCACCTCACGGAGCAGGCTCGGAAACGCCTCCAGGCGGTGTTCGAGGCGAGCGAGCTCGGCGCCGGCTTCAAGATCGCCATGCACGACCTCGAGATCCGCGGGGCGGGGAACATCCTTGGCGCCGCGCAACACGGACATGTCACCGCCGTCGGCTTCGAGCTGTACACCCAGCTTCTCGAAGAGGCCGTGAACGAGCAGCGCGGCGCGCCGCGTGCGGCGGCCCTTCCCGAGATCACAGTCGACCTGGCGCTGTCGACGGCCATCCCCGACGACTACGTCCCCAGCCGTCAGCGCAAGCTGGAGCTCTACCGGCGTATCGCCGAGCTCGCCCTCCTCGACGATCTGGCCGGCCTGCGGGAAGAGCTCCGCGATCGTTACGGTCCGCCGCCGGAACCGGTCCGCAACCTCCTCTACGGCGTCGAGGTGAAGCTGCGTGCCGTCAAAGCGGGGGCCACGGAAGTGCGCGCCCGCGGCCCCGAGCTTCGTGTGGTGCTCGGCCGGGACATCCAGCCAGACGAACGCACGCGCGTTTTGCGCTCGTTCCCGAAGGCGCAGGCGGGCCAGCGTCAGATCCGGTTGTCGGTGCTCGATGTGAAGGCCGACTGGCGCGATGCATTGACCGGTTTGCTCGATCGACTCGCAGCTTGA
PROTEIN sequence
Length: 1152
MVSAVDVARARLGGVLALAERSDAYRELASRLEDRQRLTVADANAGARAFVWAALVAENARTVALVAPSEDRARRWRAELAGWLGEDRVLAFPERETMPFEAGAPSGTAVHQRLLTLWRLATAHVPVAVVTSLRALLEHTIPPDDLARRGRTLRAGDRLSWTETAAWLFDLGYEPVTEVSEPGTFSRRGGIIDIYPASAEQPARVELFGDEIETLRAFDPVTQRSQSPLDELVVLPAREFALETAPALGERLARAGWDRLAQADGDEGPDLSPYARLLDALREGGYAPGADALAPSLGATASLLDHLGDRATVVFEDTVELDLAHDALEAQAEERRDELAAQGLPVSVFPPPYVPRSRIDARATEHGSARMGAGPNAVRLGWAGSASYAGRLNDFIAQLATPPAEGITLIATPQAARLAELLADRDITAVARETVADTPQPGSLVVARVPLAEGFVIPELGLRVFTDAEVFGFRKPRHPEQRRRRVQIGSFLADLKPGDHVVHEDHGIGRFERFITREVAGVVREYLELQFAGTDVVSLPTERVDKVTRYVGGTPPALSALGGREWGVTKRRAKKAAEEIAKELLRLYAAREATQGFAFGRDSPWQIEMENAFPYTETPDQLQAIEDTKRDMERGRPMDRLIVGDVGYGKTEVALRAAFKAVQDGKQVAIVVPTTVLAQQHFETFAERLATFPVNVEMLSRFRSPAEQRAVAEGIGTGEVDIVVGTHRVLQKDVQFRDLGLVVIDEEHRFGVKHKERLKQMRTEVDVLSMTATPIPRTLHMALSGVRDISVIETPTENRQPIETHVVERSDDVLREAIVREVDRGGQVYYVHNRVQGIEQEAHRLRELVPSARYIVAHGQMDDRRLERVMVEFADAEHDVLVCTTIIESGLDIPNVNTIVINRAGALGLAQLYQLRGRVGRSAEKAYAYLLYTKEQHLTEQARKRLQAVFEASELGAGFKIAMHDLEIRGAGNILGAAQHGHVTAVGFELYTQLLEEAVNEQRGAPRAAALPEITVDLALSTAIPDDYVPSRQRKLELYRRIAELALLDDLAGLREELRDRYGPPPEPVRNLLYGVEVKLRAVKAGATEVRARGPELRVVLGRDIQPDERTRVLRSFPKAQAGQRQIRLSVLDVKADWRDALTGLLDRLAA*