ggKbase home page

13_1_40cm_scaffold_9156_12

Organism: 13_1_40CM_Chloroflexi_67_9

partial RP 16 / 55 BSCG 14 / 51 MC: 1 ASCG 5 / 38 MC: 1
Location: 8180..8815

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-7 similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 209.0
  • Bit_score: 199
  • Evalue 5.50e-48
Pseudouridine synthase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFA0_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 209.0
  • Bit_score: 199
  • Evalue 3.90e-48
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 209.0
  • Bit_score: 199
  • Evalue 1.10e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermobaculum terrenum → Thermobaculum → Bacteria

Sequences

DNA sequence
Length: 636
ATGCGCGAAGGCCGGGTGCGTGTGGGTGGCGAGGTCGTTCGCGAAATGGGCAGCAAGGTCGCGCCCGATGCCCGCATCGAAGTCGATGGCCGCGCCGTCGCGCCGCCCGCTCCGCACCGCTATGTCCTACTCAACAAGCCCCGCGGGATCGTTTCGACGGCGCGCGATGAGCGCGGGCGTCCAACGGTCGTCGAGATGCTCGGCGCGCGCGAGCGGCTCTACCCCGTCGGCCGCCTCGACGAGGACTCCGAGGGCCTCGTGCTCCTGACGAACGACGGCGCATGGACGGAGCGAGTGCTGCACCCGCGATACGGGCACGAGCGCGAGTACGAGGTGAGCGTGGCCGGTCCCGTGCCCGCAGCTTCGATCGCCGCGCTCCGGCGCGGCGTCGCGCTCGAAGAAGGCTTGGCGCGCGCGGCACGCGTCTCGGTCGCCGGCGGCGCGCGCGGCTCGATGCTGCGCATTGTTTTGAATACCGGTTGGAAGCGGCAGGTGCGTCGCATGTGCGCCGCGGTCGGGCTCCGCGTTCTGCGACTTCGGCGCGTGCGGCTTGGCCCGCTCGAGCTCGGCCGGCTCCGGCCTGGCGCGTGGCGCGACCTCACCTCGCGCGAGATCCGCGCGCTCGGAGGGAGTTAG
PROTEIN sequence
Length: 212
MREGRVRVGGEVVREMGSKVAPDARIEVDGRAVAPPAPHRYVLLNKPRGIVSTARDERGRPTVVEMLGARERLYPVGRLDEDSEGLVLLTNDGAWTERVLHPRYGHEREYEVSVAGPVPAASIAALRRGVALEEGLARAARVSVAGGARGSMLRIVLNTGWKRQVRRMCAAVGLRVLRLRRVRLGPLELGRLRPGAWRDLTSREIRALGGS*