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13_1_40cm_scaffold_486_4

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: 4726..5316

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 195.0
  • Bit_score: 339
  • Evalue 2.40e-90
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12555766 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 197.0
  • Bit_score: 278
  • Evalue 4.80e-72
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 184.0
  • Bit_score: 182
  • Evalue 1.30e-43

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGACGTGGACGGACGAAGAGCTCGTCGCTCGATCCATCAGCGGCGATGCCGACAGCTTTAACGAGCTCATTTTGAGATGGGAGCGTCCCATCTACGCCCTTGCGTACCGCACGATCGGTCGCGAAGAGGATGCGCGAGACGTGTGCCAGGAGACGTTTCTCCGCGCGTTTCGTGCGTTGCCCGGATTCCGCGGGCAGGCGAAGTTCTCGTCCTGGCTGTACCGCATCGCGCTGAACCTGTGTCGCGACTGGGTGCGACGCGAGCGGCGCGCCCCGGTGGTGCAGGCGCCGGAGGGTGTCGATCTCATGGATCTCGCGGCGGCCGCCGAGCCGTCGGAATCGATCGAAGATCTCGTCGCGCGCAAGGATCTCTCGCGCGCGGTCGAGAAGGCGATGGCGCGGCTGCCGGAAGAGCAGCGCACCGCGATCGTGCTGAAGGAGTACCACGGCTTGACGTTCCAGGAAATCGCCGACTTGATCGGCTGCCCGTTGAGTACGGTGAAGACGCGGTTGTACCAGGGACTCACGGTGTTGCGGCGCGAGCTCGCCAAGAACGCTTCGGGCCCAAAAGGACCCGCCCTCCAGAGATAA
PROTEIN sequence
Length: 197
MTWTDEELVARSISGDADSFNELILRWERPIYALAYRTIGREEDARDVCQETFLRAFRALPGFRGQAKFSSWLYRIALNLCRDWVRRERRAPVVQAPEGVDLMDLAAAAEPSESIEDLVARKDLSRAVEKAMARLPEEQRTAIVLKEYHGLTFQEIADLIGCPLSTVKTRLYQGLTVLRRELAKNASGPKGPALQR*