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13_1_20cm_3_scaffold_3364_10

Organism: 13_1_20CM_3_Betaproteobacteria_63_8

partial RP 36 / 55 MC: 2 BSCG 34 / 51 MC: 3 ASCG 7 / 38 MC: 2
Location: 7843..8949

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVC8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 320.0
  • Bit_score: 312
  • Evalue 4.30e-82
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 333.0
  • Bit_score: 319
  • Evalue 6.40e-84
rpoD; RNA polymerase sigma-70 factor transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 384.0
  • Bit_score: 295
  • Evalue 2.60e-77

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGGCCAGAAAAGCCCTGAAGCCCGTGAAGAAATCGCACCCCAAATCCAAGGCGAAAGCCAGCCGCAGGGCAAAGCCTCGCTCGAAGCCGGCACGGAAGCACCCGACAGCCAAGTCACGCGCGCCGAAGCGGCCGAAGGCGAAAACCACGATGAAGAAACCGGCGAAGAAAAAGTCAGCGCCCGCCAAGTCGGGGCGCTCGTCGAAGTCGCCGTCCAAACGCGCGGCGAAGCCCATCGCCAAAAAGAAATCCTTGAAGAAGGTCCCGAAGAAACCTTCGGTGAAAACTTCAAGCCGCGTGGCGGGAAAGACTGCGGCCAAGCCGATTTCGGCGTCTGCCAAGGCTATCGCGCTCAAGGCCGTCGCCCTTACAACGAAAATGGCGGCGAAAGCTGCAGCGAAAGCGAATGGCAAAGGGGGCAAGGTGGCCGTCGCGGCTCCGGCTGCGGTCAAGCCGTCGCCGGGTGAAATCGCGGCCCGGCTGTCCGCCAAGCGGACTGAAAAAGCGCTCGCCGAAGGCAAAGTGCGCAGCGGCAAGAACGGCAGCGTCGAATTGCGCAAGCTCGAGTTGTCGCCGGCCGAGGCAGAAGCACGCAAGACCCGGCTGAAGAATCTGATCGTGCTCGGCAAGGAGCGCAGCTACCTCACTTACGCCGAAATCAACGATCACCTGCCTGACGACATTCTCGACGCCGAGCAGATCGAAGGCATCATCTCCATGATCAACGACATGGGGATCCAGGTCTACGACGAGGCGCCCGATGCCGAAACGCTGCTGATGTCGGAGGCGGCGCCTACCGCCGCCGCTGATGACGTCGACGAGGAAGCCGCCGAGGCCGCAGCCTCCACGCTGGACTCCGAATTCGGGCGCACCACCGACCCGGTCCGCATGTATATGCGCGAAATGGGCTCGGTCGAGCTCCTCACCCGCGAAGGCGAAATTGAAATCGCCAAGCGGATCGAGGAAGGCCTGAAGTACATGATCATGGCGATATCTGCCTGTCCGATGACCGTCGCTCAGATTCTCGACCTCGCCGCCAAGATCGAGCGCGACGAGCTCAAGATCGACGACGTCGTCGACGGACTGATGGACTTCACCGAGACCCTC
PROTEIN sequence
Length: 369
MARKALKPVKKSHPKSKAKASRRAKPRSKPARKHPTAKSRAPKRPKAKTTMKKPAKKKSAPAKSGRSSKSPSKRAAKPIAKKKSLKKVPKKPSVKTSSRVAGKTAAKPISASAKAIALKAVALTTKMAAKAAAKANGKGGKVAVAAPAAVKPSPGEIAARLSAKRTEKALAEGKVRSGKNGSVELRKLELSPAEAEARKTRLKNLIVLGKERSYLTYAEINDHLPDDILDAEQIEGIISMINDMGIQVYDEAPDAETLLMSEAAPTAAADDVDEEAAEAAASTLDSEFGRTTDPVRMYMREMGSVELLTREGEIEIAKRIEEGLKYMIMAISACPMTVAQILDLAAKIERDELKIDDVVDGLMDFTETL