ggKbase home page

13_1_20cm_3_scaffold_9277_8

Organism: 13_1_20CM_3_Betaproteobacteria_63_8

partial RP 36 / 55 MC: 2 BSCG 34 / 51 MC: 3 ASCG 7 / 38 MC: 2
Location: comp(5035..6366)

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS4 family n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07HS6_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 443.0
  • Bit_score: 695
  • Evalue 2.80e-197
  • rbh
Transposase, IS4 family {ECO:0000313|EMBL:ABJ08508.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 443.0
  • Bit_score: 695
  • Evalue 3.90e-197
transposase, IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 443.0
  • Bit_score: 695
  • Evalue 7.90e-198
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGGCCGACGAGGAGCTTTTTGGCGCCCTTCCAGTGCAGATGATTGCCCAGGCTTTTGACCCGGGTCGTCCGCGGCTGCGTGAACCGGTACGCGATCAGATTGAGCTGCGCGCAGTGGATCTCGACAGCTTGATTGCAGCGGACCATCCAGCGCGGGTGATCTGGGATTACGTCCGAGGGCTTGACTTGCGCTCGTTAGAGCAAGCGGTGCGGGCGCGTGAACACACGCCGGGTCAGGCTCCGGTCAGCCCGCGACTGCTGCTGGCGCTGTGGCTTTATGCAACCAGCGAAGGCATCGGAAGCGCGCGAGCGCTAGCTCGGATGTGCGTCAGCCATGACGCTTATCGCTGGCTTTGCGGGAGTGTAAGCGTGAACTATCACGGTCTGTCGGACTTCCGGACGGCGGATGCGAAGCTGCTCGATCAACTGCTGACCGAGAACGTCGCGACATTGTCCGCGGCCCATGTGATCAATCTGGATGAGGTCGTACAGGACGGGGTACGAGTGCGCGCGTCGGCCGGTGCGGGTTCGTTCCGGCGCAGCAAGACGCTGCACAAAGAACTGAAGAAAGCGCGCCGACGGGTTATCCAGCTCAAGCAGGAGGTCGATGACGATGCTGACGCCAGCAACCGCCGCATGCGCGCCGCCGGCGAACGAGCGGCCCGCGAGCGCGAGGCCCGTGTCAGCGCGGCGCTTGCCAAGCTTGCACAGATCGAAGCCGAGCGGGAACGCCGCGCCAAAACCAATAAAAAGCAGATTGCCAAACAGAAGGAGCCTCGAGCCTCCACCACTGACCCGCAAGCCCGCATCATGAAGATGGCCGATGGTGGTTATCGGCCGGCCTACAATTGTCAGCTTGGCACCGTTGCGAACGGCCAAATCGTGGTCGCGCTCGACGTGACGGCTATCGGCTCGGATCGCGGCCTTATGCCACCGATGCTCACGCAGATAGAACGGCGCCATGGCCGCAGGCCCAGACGTTACCTTATCGATGGCGGCTTCAACAAGAATGACGATACCGAATGGGCTGCCAGCATCGGCGTGAATGTGTATGGGCCGCCGATCCGCAGCAAGCACCAGACCAATCCCTATGCGCCTCGTCATGACGATGGTCCCGGCGTCACCGCCTGGCGTAGGCGCATGGACAGCCCACACGGCAAGGCCGTCTACAAGCGACGCAGCATGGGTGAATGCATCAACGCCCGATTCCGTCAATGGAACCTACGCCAGTTCCTGGTGCGAGGACGCCTCAAGGTTCAGGCGGTGCTGGGCATGTTTGCTCTCGCCAACAACATCCTCCAAGGCCACCGCCTCATCAATCTCGCCACATGA
PROTEIN sequence
Length: 444
MADEELFGALPVQMIAQAFDPGRPRLREPVRDQIELRAVDLDSLIAADHPARVIWDYVRGLDLRSLEQAVRAREHTPGQAPVSPRLLLALWLYATSEGIGSARALARMCVSHDAYRWLCGSVSVNYHGLSDFRTADAKLLDQLLTENVATLSAAHVINLDEVVQDGVRVRASAGAGSFRRSKTLHKELKKARRRVIQLKQEVDDDADASNRRMRAAGERAAREREARVSAALAKLAQIEAERERRAKTNKKQIAKQKEPRASTTDPQARIMKMADGGYRPAYNCQLGTVANGQIVVALDVTAIGSDRGLMPPMLTQIERRHGRRPRRYLIDGGFNKNDDTEWAASIGVNVYGPPIRSKHQTNPYAPRHDDGPGVTAWRRRMDSPHGKAVYKRRSMGECINARFRQWNLRQFLVRGRLKVQAVLGMFALANNILQGHRLINLAT*