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13_1_20cm_3_scaffold_33_16

Organism: 13_1_20CM_3_Acidobacteria_53_8

near complete RP 47 / 55 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: 16241..19321

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHS4_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 962.0
  • Bit_score: 524
  • Evalue 3.40e-145
  • rbh
Sigma-54 interacting regulator {ECO:0000313|EMBL:CDM66572.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 982.0
  • Bit_score: 1178
  • Evalue 0.0
sigma-54 interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 962.0
  • Bit_score: 524
  • Evalue 9.60e-146
  • rbh

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 3081
ATGACTAAACGTTTGCACACGGGCGATGAATCTCATCAAAGGTCTAGCTCTGATGTCGTAGACCTTGCGGACGCTCGTCAACGACTGCGCAAAAACCAGCGCGGGCGCGTATCCGTAGAAGAGATTGCGCTTGAACTTGAAGAGATTCAACTGCTGCTGGATCAGGGACTCACTTCGGAAGTCAAAAGCCGCCTGACTTCCCTGATGTCTGCCGCAAGGCACGAGCCTTCTGTGCTGGCGCGCGCGCGCTGCCTTCTCTCCGCAGCGATGGAGATGGAGGGGCGATACCGCGAATCTCTAGAAGCCGTCTCGATGTACGAGACTACGGAATCGCGCGCCAAACTTGATGCGGAGACGCGCGCCACCATGCGCGTGCAGATAGGACTGGCGCACAACTACACTGGCGATCATCCGAAAGCCATTGCGCTTCTGAACGCCGCGCTGCGCGACGCGACCGAGAATGAATCCGATGCTCAATTGGGCGCGGCCTACGCTGCGCTCGCGCGCGTCTATCGCCACATCAGCGAGTACCCGATTGCGCGCGACCATTCGCAGAAGGCTCTGGAGCATTACAGGAGCACTGGCGATTGGCGCGGGCTGGCCGAAAGTTATTTCGGCATAGCTATGGCGGACATACTTGAGGGCAAGTATGAGCAAGCTATAGAAAATTTCGAGCAAGCGTCGAAGCTGGTAGGCGACCGTCCTGCGCCATACATGCTCGGCAAGATTTACGCGAACATGGCTGGCGCGTGCTGGTTTTTGAAGCGACCGCAGGAAGGCATACGCCATATTGAAAAGGCCATAAGCTACTACGAGCGCACAGAGCATAAGAGGAATGCTGTTCTGGGCTACAACAATCTGGGCATCAACCTTCTGGTCATAGGCGACTGGGAGCGCGCGCAGAAGGCTCTGGATTACGCGCTTGAGCTAGCTTCTGAAATTGATGAGAACAGCGCGCAGCTTCCTATGGTGCTGGACTCTCTGGGCGAGCTTCACATGTGGCGCGGCAACATAGAAGAGGCCCAACGCTTTCTTGAAAGAGCCGTAGAGCTTGCGCTGAAACACGGCAACAAGTGGTACGCGGGTCAGCCCATGCTCAAGCTGGGGCGCTCTCATCTGCTGCTTAATGATGCGACGCGCGCGCTTCGTTTGGGCCAACAGGCGCTTGCCCTCGCAGAGCAGATTGGAGACCGTCAGGCCATATACGAATCGCGCCTGCTGCTTGCGGAATCCCATCTTGCGCTGGGTGATTTGAAAGAGTGCGAAACAGAACTTCAGAAAGTTTCGAGCGAGACTACGGATTCGGAAACAGACCTTGCGATAGCCGGCGAGGCGCAGCGCCTTTACGGCGCGCTCGCAATGGTGCAACAGGATGCAGAGCGCGCGGCTCATCATTTCAGCCGCAGCGTCTCTATCTTCGACATGCTAGGCGACCGCTATCGCGGCGCGCGTGCGCATTACGAACTGGGACGAACCTGCTCGCTCGCGCAGCCCGAACGTGCCGCCGAGCACCTCTCGCTAGCCGCGCACACTTTCCGCGAACTCGGCGCGCACCTTGATCTATCGCTCGCAGAAGAAGCGCTCGCTTCATTAGACCGCAACGCTCCAGAACGCCAGCGAGAGAGTTCCGCTCTCACACAGCTTCTCACGCTTCGTCTGGCCGAAGCCGTAGCCTCGCGCGAGCTTCTGCTGCGAGAACTCGTCGCAGTCATTCATCAGGAGACGGGCGCAAGCCGCGTAGTGATTTTCGAGCCGGGCGGGGCTGGCAAGTTGAAGACAGTCTTCGCGCACGGCTCGACCAGCACGGAGAGCGAGCGAATCGCGGAACAACTCTTCGGATGGGAAGATGCTGGAGAGAGAAAAATTTTAGAGAAGAAGCTGGACGCATCAATCATCACGCTGCGCTCGTCAAACTCTACGCCCGCGATTCTCTTCACTTCGCCACGCGAGCGTGCGCAGTTTCCCGGCGGCGTGTCGCTCGAACCACTGCTGCGCGTAGTCGAACTAGGCATGGACGTTTGCGCGCTGCGCGCACGCGCGCAATCGGGTCACGGCACAGAGGTGCAGGACACTCTGACAGGCTCAAGCCTGATGCCCGGCTTCATTCACTCAAGCCCTGCGATGACGCGCCTTGTAGAAGAGGTTCACAAGATTCGCTCTTCGGACGTGACCGTGCTTGTCACTGGCGAATCGGGCACAGGTAAAGAGTTGGTCGCGCGTGCTATTCACGCTATCTCTTCGCGCCGCGATAAAGTGTTCGTACCTTTTAACTGCACAGCCGTTCCGAAAGAACTGTCGGAAGGCTATCTCTTCGGCTACAAGCGCGGCGCGTTCACTGGCGCGGTTTCGGATTCTCCCGGCATGATTCGCTCTGCTGCTGGCGGCACACTCTTTCTTGATGAAATCGGCGACTTGCCTTTGGATGTTCAGCCCAAGCTTCTGAGATTTTTGCAAGAGGGCGAGATTCAACCTCTGGGCGAGCAGCGCCCCTTGAAAGTTGACGTGCGAATCATCGCCGCGACCAACACAGACCTGGAAGAGATGGTCGCGCATGGGAAGTTCAGGGAAGACCTTTACTATCGCCTGAACGTGATTCGCCTTCGCGTGCCTCCGTTGCGCGAGCGCCGCTCAGAGATTCCTACAATCGTCAACTATTACATCAACCACTACTCCGCCAAATTCGGTCGGCGCGACATCACCGTCACGCCGCCGACGATTGACCTGCTGATGGTCTGCGACTGGCCCGGCAACGTGCGACAGTTGTGTAACGAGATTCAGCGCGTAGTGGCTCGCGCAGAAGACGGCACAATCCTGACGCCCGACCAACTCTCGCCCGAACTCAAGCGAACGGCCTCGCCCATCTCGCCGCAACCCTCCATCACGCCGCTCAACGTCATCTCAGGCTCTTCCGGCCAGAATGTCACGCTCGCCGAAGCAACGGAAGAATTAGAGCGCCGCATGATCTCCGAAGCCATGCGCAAGCACAAAGGCAACATCTCGCGCGCCGCACGCGAACTCGGCCTCACACGTCGCGGCCTCTACCTGAAACTCGACCGCCTCAACATAGCCGCCAGCGCGTAA
PROTEIN sequence
Length: 1027
MTKRLHTGDESHQRSSSDVVDLADARQRLRKNQRGRVSVEEIALELEEIQLLLDQGLTSEVKSRLTSLMSAARHEPSVLARARCLLSAAMEMEGRYRESLEAVSMYETTESRAKLDAETRATMRVQIGLAHNYTGDHPKAIALLNAALRDATENESDAQLGAAYAALARVYRHISEYPIARDHSQKALEHYRSTGDWRGLAESYFGIAMADILEGKYEQAIENFEQASKLVGDRPAPYMLGKIYANMAGACWFLKRPQEGIRHIEKAISYYERTEHKRNAVLGYNNLGINLLVIGDWERAQKALDYALELASEIDENSAQLPMVLDSLGELHMWRGNIEEAQRFLERAVELALKHGNKWYAGQPMLKLGRSHLLLNDATRALRLGQQALALAEQIGDRQAIYESRLLLAESHLALGDLKECETELQKVSSETTDSETDLAIAGEAQRLYGALAMVQQDAERAAHHFSRSVSIFDMLGDRYRGARAHYELGRTCSLAQPERAAEHLSLAAHTFRELGAHLDLSLAEEALASLDRNAPERQRESSALTQLLTLRLAEAVASRELLLRELVAVIHQETGASRVVIFEPGGAGKLKTVFAHGSTSTESERIAEQLFGWEDAGERKILEKKLDASIITLRSSNSTPAILFTSPRERAQFPGGVSLEPLLRVVELGMDVCALRARAQSGHGTEVQDTLTGSSLMPGFIHSSPAMTRLVEEVHKIRSSDVTVLVTGESGTGKELVARAIHAISSRRDKVFVPFNCTAVPKELSEGYLFGYKRGAFTGAVSDSPGMIRSAAGGTLFLDEIGDLPLDVQPKLLRFLQEGEIQPLGEQRPLKVDVRIIAATNTDLEEMVAHGKFREDLYYRLNVIRLRVPPLRERRSEIPTIVNYYINHYSAKFGRRDITVTPPTIDLLMVCDWPGNVRQLCNEIQRVVARAEDGTILTPDQLSPELKRTASPISPQPSITPLNVISGSSGQNVTLAEATEELERRMISEAMRKHKGNISRAARELGLTRRGLYLKLDRLNIAASA*