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13_1_40cm_4_scaffold_1553_20

Organism: 13_1_40CM_4_Deltaproteobacteria_68_19

partial RP 40 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 7 / 38
Location: 21473..21808

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8Q6_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 57.0
  • Bit_score: 77
  • Evalue 9.10e-12
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 57.0
  • Bit_score: 77
  • Evalue 2.60e-12
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADV11828.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 57.0
  • Bit_score: 77
  • Evalue 1.30e-11

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGCCTGAACGCGCATCGGGATTCGACTCCCGCCGCCCTGCCGCCCACCGCATCCTTTGCAGCGGCCCGATCGTCCTTGTCGTAGACCGTAAGACAGGAGACGACCCATGCCGATCTGCTTTCTCGAAGCTCCCACCGGAAAACGGCGAGGACATCGTCCAGGACACTCTCGCCCGCGCGTACTACGAGCTGTCCGAGCTGAAGGAGGTTCCGGCGCTGCGGCCCTGGCTATTCCGAATCGCCCACCATCGGGCGCTGGACTTCCTGCGCCGGTACGACCGGCGGATGCGCGAGCCGCTGGAGGTTGCCATGGCGCGACTCTCGAGCGGCGGCTGA
PROTEIN sequence
Length: 112
MPERASGFDSRRPAAHRILCSGPIVLVVDRKTGDDPCRSAFSKLPPENGEDIVQDTLARAYYELSELKEVPALRPWLFRIAHHRALDFLRRYDRRMREPLEVAMARLSSGG*