ggKbase home page

08E140C01_10kDa_scaffold_602_12

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 11457..13325

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SZ81_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 622.0
  • Bit_score: 1168
  • Evalue 0.0
  • rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas ol similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 622.0
  • Bit_score: 1174
  • Evalue 0.0
preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 622.0
  • Bit_score: 1163
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1869
ATGCTCAATAAATACCCTCTGTGGAAGTACCTGCTGATTTTGTCCGTTCTGGCAATCGGCCTGGTGTACTCCATTCCCAACCTCTATCCAGATGATCCTGCCGTGCAGATCAGCGGCGCCAGTTCGGCGCTGAGTATCGAGCAGACGGATGTCGACCGTGCCAGCAAAGCGCTGACCGATGCCGGTATTGCCGTCAAGGCTGCCAGCATCGACGAGCGTGGCCGTGGCGGTCTGATTCGTCTGACCAAGCAGGATGACCAGTTGCCGGCCAAGGACATTGTCCGTCGTGCGCTGGGCGATGATTACGTCGTGGCGCTGAACCTGGCGCAAACCACCCCCGACTGGCTGCGTAGCCTGGGTGCGAGCCCGATGAAGCTCGGTCTGGACCTGTCCGGCGGTGTGCACTTCCTGCTGGAAGTCGACATGGACAAGGCGCTGGATGTGCGTCGCAAGGTCTATGAAGGTGAAATCAAGAGCCTGCTGCGCAAGGAGCGTATTCGCTACCGCAGCATGCCGGAAAGCAATAGCCGGATTCAGCTTGGCTTTGCCGACAGCGATACGCTGGACAAGGCGCAGCGTCTGATCCGCAAGGATTACAGTGATTTCGAGCTGACCACCGTCGAGCGCGGCGGCCAGCAGGTCCTGCAGTTGGGTTTGACCCAGGCGAAGATCGCCGAGATTCGCGAATACTCCATTCGCCAGAACCTCACCACCGTGCGTAACCGCGTCAATGAGCTGGGCGTGGCTGAGCCACTGGTACAGCGCCAGGGCGCCAACCGCATCGTGGTCGAGCTGCCGGGCGTGCAAGACACTGCCGAGGCCAAGCGTATTCTCGGCAAGACCGCCAACCTGGAGTTCCGTCTGCAGGCTGATCTGGATGCGCCGCGTGGTGCCACCGAGTCCTTCGGCTTCCGTGAGGAAGGTCGTCCGCCGGTGCAGCTCGAGCGTGAGCTGATCATCACCGGTGACCAGGTTACCGATGCCCAGGCCAGCTTCGACGAGAACGGTCGTCCGCAGGTGAATATCCGCCTCGACGGCCACGGTGGCGATCTGATGAACCGCGCCACGCGTAACAACGTTGGCCGCAGCATGGCGGTGATCTTCATCGAGCAGAAGCCGGTCACCCGTTACGTGCGCCAGAGCGTCGATGGCGTCGAGCAGGAGGTGGCCATCTCCTCGTTCGTCGAAGAGAAGAAGATCATCAGCCTGGCGACTATCCAGTCGGCGCTGGGCAGTCAGTTCCGCATCACCGGCCTGAACGGCCAGGGCGAGTCCTCCGAACTGGCGCTGCTGTTGCGCGCCGGTGGTCTGGCTGCGCCGATGTACTTCGCCGAGGAGCGCACCATCGGCCCGAGCCTGGGCGCCGAGAACATCGCCAAGGGCATCGACTCCACCGAGTGGGCGATGATCTTCGTGGCCCTGTTCATTATCGCCATCTATCGCTTCTTCGGTGTGCTGGCGACCGTTGCCCTGGCATTCAACCTGGTGCTGCTGGTCGGGCTGATGTCGGCCATTGGCGCGACGCTGACGCTGCCCGGCATCGCCGGTATCGTGCTGACCCTGGGGATGGCGGTAGACGCCAACGTGCTGATCTTCTCGCGGATACGCGAAGAGCTGGCCAATGGACTACCGGTGCAGCGTGCCCTGCACGAGGGCTTCGATCGTGCCTACTCGGCGATTCTCGACAGTAACCTGACCACCTTGTTGGTGGGCGGCATCCTGTTCGCCATGGGAACCGGTCCGGTGAAAGGCTTCGCGGTGACGCTGTCGCTGGGCATCATTACTTCGATGTTCACCGCCATCATGTTCACCCGTGGTCTGGTCAACCTGATCTTCGGTGGCCGTAACTTCAAGAAGCTGTGGATCTGA
PROTEIN sequence
Length: 623
MLNKYPLWKYLLILSVLAIGLVYSIPNLYPDDPAVQISGASSALSIEQTDVDRASKALTDAGIAVKAASIDERGRGGLIRLTKQDDQLPAKDIVRRALGDDYVVALNLAQTTPDWLRSLGASPMKLGLDLSGGVHFLLEVDMDKALDVRRKVYEGEIKSLLRKERIRYRSMPESNSRIQLGFADSDTLDKAQRLIRKDYSDFELTTVERGGQQVLQLGLTQAKIAEIREYSIRQNLTTVRNRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLQADLDAPRGATESFGFREEGRPPVQLERELIITGDQVTDAQASFDENGRPQVNIRLDGHGGDLMNRATRNNVGRSMAVIFIEQKPVTRYVRQSVDGVEQEVAISSFVEEKKIISLATIQSALGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGAENIAKGIDSTEWAMIFVALFIIAIYRFFGVLATVALAFNLVLLVGLMSAIGATLTLPGIAGIVLTLGMAVDANVLIFSRIREELANGLPVQRALHEGFDRAYSAILDSNLTTLLVGGILFAMGTGPVKGFAVTLSLGIITSMFTAIMFTRGLVNLIFGGRNFKKLWI*