ggKbase home page

08E140C01_10kDa_scaffold_2000_27

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 24775..24984

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein (Beta-ribbon, CspA family) n=3 Tax=Pseudomonas RepID=I7K1J5_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 143
  • Evalue 6.50e-32
cspA3; cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 143
  • Evalue 1.80e-32
Cold-shock protein {ECO:0000313|EMBL:ERI49937.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 143
  • Evalue 9.00e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. EGD-AK9 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGTCCAATCGTCAGACTGGCACCGTTAAGTGGTTCAACGATGAGAAAGGCTACGGCTTCATCACCCCGCAATCCGGTGACGACCTCTTCGTACACTTCAAAGCCATCCAGAGCGATGGTTTCAAGAGCCTGAAAGAAGGCCAGCAAGTGACTTTCGTGGCCACCCGTGGTCAGAAAGGCATGCAAGCTGAGGAAGTTCAGGTTGTCTAA
PROTEIN sequence
Length: 70
MSNRQTGTVKWFNDEKGYGFITPQSGDDLFVHFKAIQSDGFKSLKEGQQVTFVATRGQKGMQAEEVQVV*