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08E140C01_10kDa_scaffold_2378_12

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 8379..8882

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KNB5_PSEPG similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 164.0
  • Bit_score: 238
  • Evalue 6.10e-60
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:KIV72633.1}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 162.0
  • Bit_score: 262
  • Evalue 4.20e-67
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 164.0
  • Bit_score: 238
  • Evalue 1.70e-60

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Taxonomy

Pseudomonas sp. FeS53a → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGGCCCAACCCCTTCCAGGCGATTCCCTCGCAACGCTCTATCGCGGCCATCACGGCTGGCTGCTTGGCTGGCTGCGCCAACGCCTGGCCTGTCCGCAGCAGGCGGCCGATCTGGCCCAGGATACCTTCGTGCGCCTGCTGGTGCAGCGCGAGGCGCAGTCTCCGCGTGAGCCGCGGGCCTTTCTCGCCACAGTCGCCCGTGGCCTGCTGATCGATCACTACCGGCGCGCCAGTCTGGAGCGTGCCTACCTGGACGCCTTGGCGCAGTTGCCCGAACCCGAAGTGCCTTCACCGGAGAGCCAGGCGCTGGTCATGGAGACCCTGGTGGCCATCGACCGGCTGCTCGACGGTCTCAAACCGGTGGTGCGCGAAGCCTTCCTGCTGTCGCAACTCGATGGCCTGACCTACCCGCAGATCGCCGAGCGGCTGGGTCTGTCGGTCAGTTCCATCCAGCAGTACATGACCCAGGCCTTCACCCATTGCTACCGGGTGGCCTACGCATGA
PROTEIN sequence
Length: 168
MAQPLPGDSLATLYRGHHGWLLGWLRQRLACPQQAADLAQDTFVRLLVQREAQSPREPRAFLATVARGLLIDHYRRASLERAYLDALAQLPEPEVPSPESQALVMETLVAIDRLLDGLKPVVREAFLLSQLDGLTYPQIAERLGLSVSSIQQYMTQAFTHCYRVAYA*