ggKbase home page

08E140C01_10kDa_scaffold_3872_8

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(3739..5118)

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1SH89_PSEME similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 459.0
  • Bit_score: 873
  • Evalue 1.00e-250
  • rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudo similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 459.0
  • Bit_score: 874
  • Evalue 8.40e-251
ffh; Signal recognition 54 kDa protein similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 459.0
  • Bit_score: 872
  • Evalue 6.40e-251
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. 1-7 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGTTCGAAAATCTTACCGATCGCCTGTCCCAGACGCTGCGTAACGTCACGGGCAAGGCCAAGCTGACCGAAGACAACATCAAGGATACGCTGCGCGAAGTGCGCATGGCCCTGCTCGAGGCCGACGTGGCTCTGCCGGTGGTCAAGGACTTCGTCGGCAAGGTCAAGGATCGCGCCGTTGGTACCGAAGTCTCCAAGAGCCTGACCCCGGGGCAGGCCTTCGTGAAGATCGTTCGCGCCGAGCTGGAAGAGCTGATGGGCGCGGCCAACGAAGATCTGGCACTCAATGCAGCGCCACCTGCCGTGGTGCTGATGGCGGGTCTGCAGGGGGCGGGTAAAACCACCACCGCCGGCAAACTGGCCAAGTTCCTCAAGGAGCGCAAGAAAAAGTCGGTGCTGCTGGTCTCCGCCGACGTCTATCGCCCGGCTGCAATCAAGCAGTTGGAAACTCTGGCAGGCGATCTCGGGGTGACCTTCTTCCCCTCCGATGCCAGCCAGAAGCCGGTGGATATCGCCAACGCAGCGATTCGCGAAGCCAAACTGAAATTCATCGATGTGGTCATCCTCGATACCGCCGGTCGTCTGGCCGTGGATACCGAGATGATGGCCGAGATCCAGGCGCTGCATGCTGCGGTCAACCCGGTCGAAACGCTGTTCGTGGTCGACGCCATGACCGGCCAGGACGCCGCCAATACCGCCAAGGCCTTTGGTGAAGCGCTGCCGCTGACAGGCGTGGTGCTGACCAAGGTCGACGGTGATGCCCGTGGCGGTGCGGCCTTGTCCGTACGCCATATCACCGGCAAGCCGATCAAGTTCATTGGTATGGGCGAGAAGAGCGACGCGCTCGAGCCCTTCCATCCGGATCGTATCGCTTCGCGCATCCTCGGCATGGGTGACGTGCTCAGCCTGATCGAGCAGGCCGAGCAGACTCTTGATCGCGAGAAGGCCGAGAAGCTCACCAAGAAGCTGAAGAAGGGCAAGGGCTTCGATCTCGAAGACTTCCGTGATCAGCTGCAGCAGATGAAGAACATGGGCGGCCTCGGCGGCCTGATGGACAAGCTGCCGTCCATCGGTGGCGTCAACCTGTCGCAGATGGGTAGCGCTCAGGGCGCGGCCGAGAAGCAGTTCAAGCAGATGGAGGCGATCATCAACTCGATGACGCCCGCCGAACGCCGCGACCCTGACATCATCAGTGGCTCGCGCAAGCGCCGCATCGCTATGGGCTCCGGTACCCAGGTGCAGGACATTGGTCGCCTGATCAAGCAGCACAAGCAGATGCAGAAGATGATGAAGAAATTCACCGCCAAGGGTGGTATGGCCAAGATGATGCGCGGCATGGGTGGCATGCTCCCAGGTGGCGGCGGAATGCCGAAATTCTGA
PROTEIN sequence
Length: 460
MFENLTDRLSQTLRNVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVGKVKDRAVGTEVSKSLTPGQAFVKIVRAELEELMGAANEDLALNAAPPAVVLMAGLQGAGKTTTAGKLAKFLKERKKKSVLLVSADVYRPAAIKQLETLAGDLGVTFFPSDASQKPVDIANAAIREAKLKFIDVVILDTAGRLAVDTEMMAEIQALHAAVNPVETLFVVDAMTGQDAANTAKAFGEALPLTGVVLTKVDGDARGGAALSVRHITGKPIKFIGMGEKSDALEPFHPDRIASRILGMGDVLSLIEQAEQTLDREKAEKLTKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGVNLSQMGSAQGAAEKQFKQMEAIINSMTPAERRDPDIISGSRKRRIAMGSGTQVQDIGRLIKQHKQMQKMMKKFTAKGGMAKMMRGMGGMLPGGGGMPKF*