ggKbase home page

08E140C01_10kDa_scaffold_21587_1

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonadale_63_1300

near complete RP 49 / 55 MC: 3 BSCG 46 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(3..1103)

Top 3 Functional Annotations

Value Algorithm Source
porin n=1 Tax=Pseudomonas alcaliphila RepID=UPI00037BAB52 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 346.0
  • Bit_score: 709
  • Evalue 1.60e-201
Tyrosine-specific porin OpdT {ECO:0000313|EMBL:GAD65026.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 367.0
  • Bit_score: 629
  • Evalue 2.20e-177
outer membrane porin similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 367.0
  • Bit_score: 579
  • Evalue 6.90e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas alcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGCTTAATAAAACCAAACTATCCCTTGCAGTATTTTCGGCGATTGTCAGTGCAGCTCCGCTCATGGCGGCCGCAGAAGAGCAAGCCGAAGGTTTTGTAGAAGGTAGCAGTTTCAATATTCTCAACCGTAACTTCTACATGAATCGTGACTTTCGTAAAGGTCAGTCGAGCAACACTGACAATGGTTATACTGAAGCTTGGGCACACGGGATCATTGGCCAGTTCGAGTCGGGCTTTACCCAAGGCACCGTAGGCTTTGGTATTGATGCCTTCGCCATGCTCGGCCTTAAACTGGATACCGGGGATGGTCGATATGGCCCAGGTGGTACTGTTAATCTGCTGCCGGTAAATAGTGATGGTGAAGCCGAAGATAACTACTCCAAAGTGGGTGGTGCAGTAAAAGCCCGGCTATTCGACACCGTTGTCAAAGTGGGTGATGTGTTCCCCATGACGCCGGTGGTTCACTACGGTGACTCCCGCCTGCTACCGGAAAGCTTTCGCGGCGTTACGGTTGAGAACACAAGCTTTGATGGTTTGACCCTTCAGGGTGGCCGCCTGCATGCCATGAGCCAGCCGCAGGTCAGCACCATGCGTGATGAGTTCGCAACCTTCTATGCGGGCTCTGTCGCGTCTCCATGGGTTGCCTATTTCGGCGGTGACTATTCGCTAAATGACAACCTGAGCTTTAGTCTCTATAGCAGCCAACTCAAGGATGCTTGGAAGCAGCACTATGCCGGTACGTCCTTCACCTACCCGCTGACCGACAGTGTTTCCTTGTTCGGTGGCTTGAACTACTACAAAGCTGTTGATGACGGCCAGCAGCTGTTGGGTGAGTTCGATAACGACATTTACAGCGGCAAAGTGGGTGTGCAGTTCGGTGCACACAGCGTTGCCCTGTCGCACCAGCGCAACAACGGCGACGATGATTTCGACTACCTGCGCCAGTCTGATTCCATCTTCCTCGACAACTCTATTCAGTACAGCGACTTCAACTCGCCGAAAGAGAAGTCCTGGATGCTGCGCTACGACCTAGATATGGCCAGCTATGGCGTTCCTGGACTGACCTTCATGACGCGCTATGCGCTGGGTACAGATGCGGAC
PROTEIN sequence
Length: 367
MLNKTKLSLAVFSAIVSAAPLMAAAEEQAEGFVEGSSFNILNRNFYMNRDFRKGQSSNTDNGYTEAWAHGIIGQFESGFTQGTVGFGIDAFAMLGLKLDTGDGRYGPGGTVNLLPVNSDGEAEDNYSKVGGAVKARLFDTVVKVGDVFPMTPVVHYGDSRLLPESFRGVTVENTSFDGLTLQGGRLHAMSQPQVSTMRDEFATFYAGSVASPWVAYFGGDYSLNDNLSFSLYSSQLKDAWKQHYAGTSFTYPLTDSVSLFGGLNYYKAVDDGQQLLGEFDNDIYSGKVGVQFGAHSVALSHQRNNGDDDFDYLRQSDSIFLDNSIQYSDFNSPKEKSWMLRYDLDMASYGVPGLTFMTRYALGTDAD