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08E140C01_10kDa_scaffold_24_15

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonas_60_280

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(15199..15747)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AFJ9_PSEF1 similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 181.0
  • Bit_score: 286
  • Evalue 2.10e-74
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 182.0
  • Bit_score: 352
  • Evalue 4.40e-94
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 181.0
  • Bit_score: 286
  • Evalue 6.00e-75

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Taxonomy

R_Gammaproteobacteria_60_43 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGGCGCAGCCGCTGTTTGATTACGAAAGCCATCTGGAAGCCTGCGCCCGGCAGGACGACCGCGCATTCCAGGCGCTCTACCAACAGGAGGCTGCGCAAATGCTCGGGTTGGCCATCACCCTGCTCGGCCGCCGTGATCAAGCCGAAGACTGCGTGCACGATGCCTTTGTGCAGATATGGCGTAACGCACAACGTTTTCAGCGCGCGCTTGGCAGCGGCCGTGCGTGGATCTACAGCATCCTGCGCTACCGCGCGCTGAATCAGCTACGTAGCCGTGGCCGCACTGTGGAGCTGGATGACGACTTTATCGAACGCGCCGCCGACGACAGCCCACAGGCTGCCGAACTGCTGGAGCAACAGGGCGAAAAACAGCAACTGCGCCGCTGCCTGCAAAGTATCGAACGCAACCGCCGTCATCCGATTCTACTGGCCTTCTATCGCGGCCTGACCCATGAACAGATTGCCAACCGCCTGACCACCCCGCTGGGCACCATCAAGGGTCGTATTCGCGCCGGTCTGCGCGCACTGCAGGAGTGTTTGCAAGCATGA
PROTEIN sequence
Length: 183
MAQPLFDYESHLEACARQDDRAFQALYQQEAAQMLGLAITLLGRRDQAEDCVHDAFVQIWRNAQRFQRALGSGRAWIYSILRYRALNQLRSRGRTVELDDDFIERAADDSPQAAELLEQQGEKQQLRRCLQSIERNRRHPILLAFYRGLTHEQIANRLTTPLGTIKGRIRAGLRALQECLQA*