ggKbase home page

08E140C01_10kDa_scaffold_17009_7

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonas_stutzeri_63_190_partial

partial RP 17 / 55 BSCG 21 / 51 ASCG 11 / 38 MC: 3
Location: comp(2919..4562)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 304.0
  • Bit_score: 606
  • Evalue 3.00e-170
tRNA pseudouridine synthase D n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GMT3_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 304.0
  • Bit_score: 606
  • Evalue 2.10e-170
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 304.0
  • Bit_score: 606
  • Evalue 6.00e-171

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas stutzeri → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
ATGACCGAAGACCAGTTGCTCGGGCCGCGTGCCCATGGCGAACCTTGCGGCAGTGCCGTACTGAAGGCGGTCGCGGAGGATTTCCAGGTAGGCGAAGTGCTCGACATTCCGCTGTCGGGAGAGGGCGAGCACCTCTGGTTGTGGGTGGAAAAGCGCAATCTGAATACCGAGGAAGCTGCCAAACGCATCGCCCGCGCCGCCGGCGTGCCGTTGAAGATGATCAGCTATGCCGGGTTGAAAGACCGGCAAGCGCTGACCCGGCAATGGTTCAGCCTGCATCTGCCGGGCAAGGCCGACCCCGATCTGGCCGCCGCCGAGAGCGACGGCCTGGCGATCCTCAAACGCACCCGGCATCAGCGCAAGCTGCAGCGTGGCGCGCACTCGGCCAATGGCTTCCGCCTGCGCCTGAGGGCATTGCAGGGTGAACACGCCGCGCTCGATGCGCGCCTGCAACGGATCAAGGTCAACGGCGTGCCGAACTATTTCGGCCTGCAGCGTTTCGGCTATGACGGCGGCAATCTGCACGGTGCGCGCGAGTACGCCGCCAAAGGTGAGCTGCCAGTGCAACGCAATCTGCGCTCGCGCCTGCTCTCAGCGGGGCGTAGCTATCTGTTCAATAAGGTACTCGCCGCGCGGGTTGCCGATGGCAGCTGGAACCAGGCAAGAGTTGGCGATCTGCTGGCATTCACCGACAGCCGCAGCTTTTTCCCGGCTGGGGCGGCGGAATGCAACGACCCGCGCCTTGCCATCCTGGACCTGCATCCAACCGGTCCGTTATGGGGAATTGACGGCTCGCCGGCGGGCGACGAAATACAGGCGCTCGAAAATGCTGTCGCCGCAACTGACTCAGCGCTCGTCAATTGGTTGGCGCAAGCTGGAATGAAGCACGAACGGCGCATTCTTCGTCAGCCTGGCAGGGCAGACGGACATCTGATGCGTATTCTGATCGCCAACGACGACGGGGTGTATGCACCCGGGCTCGCCGCGCTTTATGACGCGCTGGCGGACTATGCCGAGTGCAAGGTGGTAGCCCCGATTCAGGACATGAGCGGCGCCAGCAGCGCGCTTACCCTGGACCGCCCGCTTCACCCGGTAAGCATGCCGAACGGCTTCATTGGCCTGAACGGCTCGCCCACCGATTGCGTGCACCTCGGCCTCAACGGCCTGCTCGAGGAAGCGCCTGATATGGTGGTCTCAGGCATCAATCTCGGCGCCAATCTCGGCGACGATGTGCTCTATTCCGGTACGGTTGCTGCGGCCATTGAAGGACGTTTCACCGGCCGTCCGGCTTTCGCCTTCTCGCTGGTATCACGCTCGACGGAAAACCTGCCGACTGCCGCTCATATCGCGCGCATGCTGGTCGAAAAGCACGACCAGCTGGAGCTGCCGCCACGTACGGTGCTCAGCGTCAACGTGCCAAACCTGCCCCTCGACCATATCCGCGGCATTCGCCTGACTCGTCTGGGGCATCGCGGCAAGGAAGGCTACTGGATCTCGGTGGCCGGTGACGTCGAAGACGGCGGGCCGGGTACCGATTTCCATGCGGTGATGCAGGGCTACGTATCGATCACGCCACTGCAGCTGGATCGAACCTTCCATGAGGCCTTCGGCGGTCTCGAAAGCTGGCTGGAGAGTGTGCTGTGA
PROTEIN sequence
Length: 548
MTEDQLLGPRAHGEPCGSAVLKAVAEDFQVGEVLDIPLSGEGEHLWLWVEKRNLNTEEAAKRIARAAGVPLKMISYAGLKDRQALTRQWFSLHLPGKADPDLAAAESDGLAILKRTRHQRKLQRGAHSANGFRLRLRALQGEHAALDARLQRIKVNGVPNYFGLQRFGYDGGNLHGAREYAAKGELPVQRNLRSRLLSAGRSYLFNKVLAARVADGSWNQARVGDLLAFTDSRSFFPAGAAECNDPRLAILDLHPTGPLWGIDGSPAGDEIQALENAVAATDSALVNWLAQAGMKHERRILRQPGRADGHLMRILIANDDGVYAPGLAALYDALADYAECKVVAPIQDMSGASSALTLDRPLHPVSMPNGFIGLNGSPTDCVHLGLNGLLEEAPDMVVSGINLGANLGDDVLYSGTVAAAIEGRFTGRPAFAFSLVSRSTENLPTAAHIARMLVEKHDQLELPPRTVLSVNVPNLPLDHIRGIRLTRLGHRGKEGYWISVAGDVEDGGPGTDFHAVMQGYVSITPLQLDRTFHEAFGGLESWLESVL*