ggKbase home page

08E140C01_10kDa_scaffold_15714_2

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Pseudomonas_58_33_partial

near complete RP 41 / 55 MC: 2 BSCG 42 / 51 ASCG 10 / 38 MC: 1
Location: comp(342..1022)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Pseudomonas pelagia RepID=UPI00039D71E6 similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 226.0
  • Bit_score: 436
  • Evalue 2.10e-119
  • rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 226.0
  • Bit_score: 433
  • Evalue 2.40e-118
30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 228.0
  • Bit_score: 407
  • Evalue 2.90e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. 12M76_air → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGGGTCAGAAAGTACATCCGACAGGCATTCGCCTCGGTATTGTTAAACAACACACTTCGGTGTGGTACGCAGAAGGCCGCACTTATGCGGACTATCTGAATACAGATCTGAAAGTACGTGCGTACGTTCAGGACAAGTTGAAAGCTGCTTCGGTCAGCCGCGTTGATATCCAGCGCCCGGCACAAACCGCCAAGATCACCATTCACACTGCCCGTCCGGGTATCGTGATTGGCAAGAAGGGCGAGGATGTCGAAAAGCTGCGTCAGGAACTGACCAAGCAGATGGGCGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGGTGCCCTGGTAGCACAAAGCGTTGCTCAGCAGCTCGAGCGTCGTGTGATGTTCCGTCGCGCCATGAAGCGCGCCGTACAGAACGCCATGCGGATTGGTGCAAAGGGTATCAAGATTCAGGTTAGCGGCCGTCTCGGCGGCGCCGAAATCGCCCGTACCGAATGGTACCGCGAAGGTCGTGTGCCGCTGCACACCCTGCGCGCCGACATTGATTACGCAACGGCTGAAGCCCACACCACATACGGTGTGATTGGCGTCAAGGTTTGGATCTTCAAGGGCGAGATTATTGGTGGTATGCCTGAAGAAACCAAAACTGCCGCTCCCAAGAAAAAAGCTGCTAAGTAA
PROTEIN sequence
Length: 227
MGQKVHPTGIRLGIVKQHTSVWYAEGRTYADYLNTDLKVRAYVQDKLKAASVSRVDIQRPAQTAKITIHTARPGIVIGKKGEDVEKLRQELTKQMGVPVHINIEEIRKPELDGALVAQSVAQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRADIDYATAEAHTTYGVIGVKVWIFKGEIIGGMPEETKTAAPKKKAAK*