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08E140C01_10kDa_scaffold_1115_4

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Methylomicrobium_alcaliphilum_49_11

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: 5978..9439

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969, ECO:0000313|EMBL:CCE23903.1}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969, ECO:000 similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 999.99
  • Bit_score: 2181
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Methylomicrobium buryatense RepID=UPI000346ADE2 similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 999.99
  • Bit_score: 2183
  • Evalue 0.0
  • rbh
mfd; transcription-repair-coupling factor similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 999.99
  • Bit_score: 2181
  • Evalue 0.0
  • rbh

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Taxonomy

Methylomicrobium alcaliphilum → Methylomicrobium → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3462
ATGTCCAAACATCAAGATTTGATTTTTTCCACCGAAATTCCAGTACAAGCCCATACCATTTCAATTTGGACCGGTTTAAACGGTTGCGGCGATTCGCTCGCGCTGGCATCGGCGATACAACAAGAAAAGCGCTTGTTCGTGATTATTACGCCGGATAGTCAAACTGCATTGCGTCTTGAGCATGAACTGGCGTTCTTTCTGCAAAACAAGCATCCTATTTTGCATTTTCCCGACTGGGAAACCCTTCCTTACGACGTGTTCTCGCCGCTGCCGGACATTGTCTCGGAACGCTTGAAAACGCTCGCGGTGCTGCCCGAAGTCCAACGCGGCGCGCTGATCGTGCCGGTCTCGACCCTGATGCACCGGCTCGCGCCGCGAGATCATGTACTCGCGAACAGTTTTTCGATCAGCGTCGGCGACACCTTCAATCTGGAACTGAACCGCGCGAAACTCGAAAGCGTAGGTTATCAGTGCGTGTCTCAGGTCTATCAGCACGGCGAATTCGCTGTGCGCGGCGCGATCGTCGATCTGTTTCCGATGGGCAGTAAGGTGCCTTACCGGATCGAATTGTTCGACGAAGACATCGAATCGATTCGCACCTTCGACCCTGAAACTCAGCTTTCGGTCGAAAAGATCGATCGCATTCAATTGTTTCCGGCGCGCGAATTTCCGTTCACGGACGAGGCGATCAAGCATTTTCGGCAAGGCTTCAGAACCCGTTTTCCGAATGCGTCGCCGAAGAACAGTTTGTATCTCGACGTCAGCAAGGGCGTCGCGTTCGGCGGCATCGAATATTATCAACCGTTGTTCGTCGAAAGCACCGCGGCGCTGTTCGATTATCTGCCCGATTCGGCGGTGCTGGTCGCGGCCGAAAATTTTGCGCAAAGCACTGAGTCTTTCTACAACGAGGCCAAAGAGCGTTACGAACAGCGCAAATACGACGTCGAACGGCCGTTGCTCGAACCCGAACTGCTGTTCTTGTCGCCGCAAGAGATGCGCGAGCGGACCGAAAGATTCGCGCGTATCACACTGAGCCCGCTCAAACTCGGCGGAAGCAGCGAAATTGATTTTCACTGCAAGCCGCTGCCGGACGTGACGATCGACGCGAAGTTGAAGGAACCGTCGCGCGCGCTGCAACAATTTCTCGACGAGTTTCCGGGTAAGGTCTTGTTCGTCGCCGAAACGGCCGGACACAGAGAAGACCTGATCGGCAAATTGAGCAAATTCGGCATCAAGACCCAATTAGTAGAGCATTGGAACGCCTTTCTGCAATCCGAACAATCGCCGTGCATGGTCGTCGCGCCGATGGATCAAGGCTTGTGGCTGGACAGTCCGGCGATTGCTGTGATCACCGAAAGCCAGTTGAGCGGCGAGAAGGTCCAGCAGCGTCGCCGTCGCCGCAAATCGGCCGCGAAAGAACTCGAAAACATCGTCAACAATCTGAACGAATTGACGATCGGCTCGCCGGTCGTGCATGTCGAGCATGGCGTCGGGCGTTATTTGGGCCTTCAGACCCTCGAACTCGGCGGTATGACCGCGGAGTTTCTGATGCTCGAATACGCGAACAACGACAAGCTTTACGTGCCGGTTTCGTCGCTGAACCTGATCGGGCGCTATACCGGCATCAGCCCCGAAAACGCGCCGCTGCACCGACTCGGCGGCGATCAATGGAGCAAGGCGAAGAAAAAGGCGATGGAGCGCATTCGCGACGTCGCGGCCGAATTACTCGACATCCACGCGAAACGCGCGATGAAGAAAGGTCACGCCTTCGATGTCGACAACACCGAATACCAAGCCTTCGCGGCCGCGTTCCCGTTCGAGGAAACGCCGGATCAGCAAACAGCGATCGAAGCGATCCTCGACGACATGGCCAGCTCGCAGCCGATGGACCGCGTGATCTGCGGCGACGTCGGCTTCGGCAAGACCGAAGTGTCGATGCGCGCGGCCTTCATCGCGGTGCAAAGCGGCAAGCAAGTCGCGGTGCTGGTGCCGACCACGCTGTTGGCGCAGCAGCATTATCAGAATTTCCGCGACCGTTTCGCCGACTGGCCGGTGCGCATCGAAGTGATGTCGCGCTTCGTGACGCCGAAGCAGCAAAAAGCGATTCTCGAAGATCTGGAGCAGGGCAAGGTCGATATCGTGATCGGCACGCACAAACTGCTGTCGAGCGAAATCAAATACCGCGAACTCGGGCTGGTCGTCATCGACGAGGAACACCGTTTCGGCGTGCGCCAGAAGGAGCATTTCAAGAAACTGCGCAACGAGATCGACATGCTGACGCTGACCGCGACGCCGATTCCGAGAACCTTGAACATGGCGATGTCGGGCCTGCGCGAGATCTCGATCATCGCGAGCCCGCCGCCGAACCGCCATGCGATCAAGACCTTCATCAGCGAATGGATCGACTCGCAGATCAAAGAGGCCTGCCAGCGCGAAATCAAGCGCGGCGGACAGGTGTTCTTTTTGCACAACGACGTCAAGTCTATGGAAAAGATGGCGCGCCAGCTCGAAACCCTGGTGCCCGAGGCGCGCATCGAAATCGCGCACGGCCAGATGCCCGAGCGCGAACTGGAAAGGATCATGCTCGATTTTTATCATCAGCGATTCAATCTGTTGCTCAGCACGACGATCATCGAAAGCGGCATCGACATCCCGAGCGCGAACACGATCGTGATCAACCGCGCCGACAAGCTCGGACTCGCGCAATTGCACCAGTTGCGCGGCCGGGTAGGGCGTTCGCATCATCGCGCCTACGCCTATTTCGTGATTCCGCCGAAAACGGTCATGACCAAGGACGCGTTGAAACGGCTCGAAGCGCTCGAAGCGTCCGGCGATTTGGGCGCAGGCTTCATGCTGTCGTCGCACGACATGGAAATTCGCGGCGCCGGCGAATTGCTAGGCGACGAACAAAGCGGACAAATCCAGGAGATCGGCTTCACGCTCTACACCGACCTGCTCGAACGCGCGGTCAACGCCTTGAAATCGGGCCGCCAACCCGAACTCGACGCGCCGATGGAAACCGGCCCCGAAGTCGATCTGCAGTCGCCGGCCTTGATTCCGGAAGATTACCTGCCCGACATCCACGCCCGGCTGGTATTGTACAAACGCATCGCCAGCGCCGACACACACGAAGACCTCAGAGCCCTGCAAATCGAAATGATCGACCGCTTCGGCCTGCTGCCGGAAGCGGTCAAGACGCTGTTCAGCGTCGCCGAATTGAAACAGCAAGCCGAAAAACTCGGCATCAAGAAAATCGAAGCGAACGCCGGCGGCGGCCGCATCGTGTTCTCGCACGAACCGAAGATCGACGCGGCCCGCCTGATCGAATTGATACAAACCCAGGCGCAAGTCTACAAATTCGACGGCGCGGACAAATTGCGCTTCATCATGCCGTTCAAGGCAACGGAAGAAAAGCTGGAATTCATCGAGGCATTGTTGAAACAGTTGGCGCCGGCGGATTGA
PROTEIN sequence
Length: 1154
MSKHQDLIFSTEIPVQAHTISIWTGLNGCGDSLALASAIQQEKRLFVIITPDSQTALRLEHELAFFLQNKHPILHFPDWETLPYDVFSPLPDIVSERLKTLAVLPEVQRGALIVPVSTLMHRLAPRDHVLANSFSISVGDTFNLELNRAKLESVGYQCVSQVYQHGEFAVRGAIVDLFPMGSKVPYRIELFDEDIESIRTFDPETQLSVEKIDRIQLFPAREFPFTDEAIKHFRQGFRTRFPNASPKNSLYLDVSKGVAFGGIEYYQPLFVESTAALFDYLPDSAVLVAAENFAQSTESFYNEAKERYEQRKYDVERPLLEPELLFLSPQEMRERTERFARITLSPLKLGGSSEIDFHCKPLPDVTIDAKLKEPSRALQQFLDEFPGKVLFVAETAGHREDLIGKLSKFGIKTQLVEHWNAFLQSEQSPCMVVAPMDQGLWLDSPAIAVITESQLSGEKVQQRRRRRKSAAKELENIVNNLNELTIGSPVVHVEHGVGRYLGLQTLELGGMTAEFLMLEYANNDKLYVPVSSLNLIGRYTGISPENAPLHRLGGDQWSKAKKKAMERIRDVAAELLDIHAKRAMKKGHAFDVDNTEYQAFAAAFPFEETPDQQTAIEAILDDMASSQPMDRVICGDVGFGKTEVSMRAAFIAVQSGKQVAVLVPTTLLAQQHYQNFRDRFADWPVRIEVMSRFVTPKQQKAILEDLEQGKVDIVIGTHKLLSSEIKYRELGLVVIDEEHRFGVRQKEHFKKLRNEIDMLTLTATPIPRTLNMAMSGLREISIIASPPPNRHAIKTFISEWIDSQIKEACQREIKRGGQVFFLHNDVKSMEKMARQLETLVPEARIEIAHGQMPERELERIMLDFYHQRFNLLLSTTIIESGIDIPSANTIVINRADKLGLAQLHQLRGRVGRSHHRAYAYFVIPPKTVMTKDALKRLEALEASGDLGAGFMLSSHDMEIRGAGELLGDEQSGQIQEIGFTLYTDLLERAVNALKSGRQPELDAPMETGPEVDLQSPALIPEDYLPDIHARLVLYKRIASADTHEDLRALQIEMIDRFGLLPEAVKTLFSVAELKQQAEKLGIKKIEANAGGGRIVFSHEPKIDAARLIELIQTQAQVYKFDGADKLRFIMPFKATEEKLEFIEALLKQLAPAD*