ggKbase home page

08E140C01_10kDa_scaffold_921_9

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Methylomicrobium_alcaliphilum_49_11

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: comp(10203..12083)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, VC_A0110 family n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T2W9_META2 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 626.0
  • Bit_score: 1257
  • Evalue 0.0
  • rbh
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 626.0
  • Bit_score: 1257
  • Evalue 0.0
  • rbh
Type VI secretion protein, VC_A0110 family {ECO:0000313|EMBL:CCE23622.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 626.0
  • Bit_score: 1257
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylomicrobium alcaliphilum → Methylomicrobium → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1881
ATGGATCCGAAATTATTGCGCTATTACAACACGGAACTACACCACTTGAGGGAAATGGGCGGCGAATTCGCCGTCGAGTTTCCTAAGATTGCAGCGCGCTTGGGTATGGATAGCTTTGAATGCGCAGATCCTTATGTCGAACGATTATTGGAAGGATTTGCCTTTTTGGCGGCACGCGTCCAATTGAAGCTCGATGCCGAGTTTCCCCGATTTACCCAGCATTTGCTGGAAATGATATACCCGAATTATCTCGAGCCGACTCCGTCTATGGCCGTCGTGCAATTTCAACCCGATTTAACGGAAGGTTCGTTAAATGAAGGTTTTACGATAGAAAGAGCAACCGCGTTACGTAGCCAAACGACAAAAGGCGAACAAACCCCCTGCGAATATCGCACCGCGCACGAAATCAAACTTTGGCCTTTACAAATCCACGAAGCGGAATATCTGCCCAATCTTGGGGCCGTGGCAAACCTCTGCGCACATAATCTGACCGGGGTAAAAGCCGCGATTCGCATCCGGCTCAAAACCACGGCAGGTTTGAAATTCAATGAGTTAAAATTGGATTCCTTACCCGTTTTTTTACGAGGGCATGGCGAATTGCCGATGCACTTATATGAACAAATGATTGGCGATTCGTTAGCCGTTTGCATGCAGCCGACCGAAAAACCTTATCGCTGGCAACATTTAGTCAAAGATAATGCGGTAACCCGGATAGGCTTTTCCGATGAAGAAGCCTTGCTCAATTATTCGCCTCGTTCTTTCCAGGGGTACCGTCTTCTGCAAGAATATTTTGCCTTTCCGGAACGCTTTATGTTTGCAGAATTTAACGGTTTCGCTCAAGCGTTGAATCAGTGCGATGCCGAAGAGATGGATTTAATCGTTCTGCTAAAACGAAGTCACGCAAAACTGATTAATGCCGTCGATAGATCTCAATTTGCGTTGTTTTGTACTCCGGCGATCAATTTGTTTCCCAAGCATGCCGATCCTATTTATATCGATCGGAAGTCGTCCGAATTTCATATCATTCCGGACCGCTCCAGACCGATGGACTTTGAAATTTGCCAAATCAAAGAAGTCATTGGCATTGGGAGCGGGGGCGTCAATGAAAAAAAGGAATTTCAGCCGTTTTATCGATACAGCGACGAACGTAGTCATGACGTCCGGCCGGCTTATTATTCGTTACATCGGCAACAACGGATAGCTTCGTCGAAACAAAAACGTCAAGGACCGCGATCGAGTTATATCGGCAATGAGACCTTTATTACGCTGGTCGACGGGCAATCGGCGCCTTACAGTAACGACCTTAAACAACTATCGATCAAGGCGCTTTGTAGTAATCGCGATTTACCGTTGCTGATGCCGTTGGGTGGAGGAAAAACCGACTTCACGATGCAGAAGGGCGCGCCGGTACAAAGCATCCGTTGCCTTTCAGGTCCCACTAAACCTCGGTCGTCGACCGCCTATGGCAATGTCAATTGGAGTTTAATCAATCATTTGTCGATGAACTATTTAAGTTTAATCGACCGTAATGACAAAGAAGGTGCCGTCGCTCTGAGAAGTTTATTGAAGTTATATAGCGAATACAATGTTGCCGCTATTACTAATCAGATCGAGGGATTGTTGTCGATTCAAGCGAAAGATATCGTCAGGCGGATCAATACGGCCGGCCCTATCGTTTTTGGGCGCGGCTTAGAAATAACCTTGAACTTCGAAGAGTCTGCTTTTGAAGGCAGCGGCGTCTTCTTGATGGGAGCAGTGCTGGAAAATTTTTTAGCCCGCTATGTTTCAATTAACTCGTTTACCGAAACCGTGGTCAAGTCCCCGGATCGTGGAGAAATCATCAGATGGCCGGCGAGAATAGGTCGAAGAAAAACGATTTAA
PROTEIN sequence
Length: 627
MDPKLLRYYNTELHHLREMGGEFAVEFPKIAARLGMDSFECADPYVERLLEGFAFLAARVQLKLDAEFPRFTQHLLEMIYPNYLEPTPSMAVVQFQPDLTEGSLNEGFTIERATALRSQTTKGEQTPCEYRTAHEIKLWPLQIHEAEYLPNLGAVANLCAHNLTGVKAAIRIRLKTTAGLKFNELKLDSLPVFLRGHGELPMHLYEQMIGDSLAVCMQPTEKPYRWQHLVKDNAVTRIGFSDEEALLNYSPRSFQGYRLLQEYFAFPERFMFAEFNGFAQALNQCDAEEMDLIVLLKRSHAKLINAVDRSQFALFCTPAINLFPKHADPIYIDRKSSEFHIIPDRSRPMDFEICQIKEVIGIGSGGVNEKKEFQPFYRYSDERSHDVRPAYYSLHRQQRIASSKQKRQGPRSSYIGNETFITLVDGQSAPYSNDLKQLSIKALCSNRDLPLLMPLGGGKTDFTMQKGAPVQSIRCLSGPTKPRSSTAYGNVNWSLINHLSMNYLSLIDRNDKEGAVALRSLLKLYSEYNVAAITNQIEGLLSIQAKDIVRRINTAGPIVFGRGLEITLNFEESAFEGSGVFLMGAVLENFLARYVSINSFTETVVKSPDRGEIIRWPARIGRRKTI*