ggKbase home page

08E140C01_10kDa_scaffold_1239_1

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Methylomicrobium_alcaliphilum_49_11

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: comp(2..427)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00038068F9 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 142.0
  • Bit_score: 230
  • Evalue 8.20e-58
Type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:KGM07000.1}; TaxID=392484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="M similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 142.0
  • Bit_score: 171
  • Evalue 1.10e-39
General secretion pathway protein F similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 142.0
  • Bit_score: 166
  • Evalue 4.10e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylophaga thiooxydans → Methylophaga → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGCCGCAGTTTTCATATACAGCGCTCGATGCCCGAGGCGCCGAGATCGTTGGACAAGTGCAGGCCGACGATAGCCAGTCGGCGGCTTTGTTGTTGCGTCAACGCGGCTTACGTCCGATGGAATTGAAACCGGCGCGCAATCGCTCCGGTTTTTTGGGTCAGGAAAACTTTTCCGATTGGTGGGCTTCGCAGCGTTCGGTGAGCAATGCATCGTTGATTTTTTTCTTCCGGCAGATGTCGTTCATGCTACGCGCAGGTCTTCCGGTCGCTCAGGCGCTCGAGCTCGCAAAGGCGCAATTGACGAGTCCCCGGCTCAATCTGACCATTCGTTTGATGTTGAAGGATATCGAAGCCGGACAGTCGTTATCGGCGGCGATGAAAAAACATCCGGCGGTTTTTCCGGACATGGCGGTAAACCTGGTCGTC
PROTEIN sequence
Length: 142
MPQFSYTALDARGAEIVGQVQADDSQSAALLLRQRGLRPMELKPARNRSGFLGQENFSDWWASQRSVSNASLIFFFRQMSFMLRAGLPVAQALELAKAQLTSPRLNLTIRLMLKDIEAGQSLSAAMKKHPAVFPDMAVNLVV