ggKbase home page

08E140C01_10kDa_scaffold_1757_1

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Methylomicrobium_alcaliphilum_49_11

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: comp(94..801)

Top 3 Functional Annotations

Value Algorithm Source
restriction endonuclease n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B79AD8 similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 233.0
  • Bit_score: 223
  • Evalue 2.20e-55
Type I restriction-modification system {ECO:0000313|EMBL:BAQ66926.1}; TaxID=1617448 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIE similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 244.0
  • Bit_score: 230
  • Evalue 2.50e-57
specificity determinant for hsdM and hsdR similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 240.0
  • Bit_score: 194
  • Evalue 4.00e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geminocystis sp. NIES-3709 → Geminocystis → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGACTGAGAGACTAATTATGCTTTCTGAAGTGTGCTCTGTCCAAAGTGGAGGAACACCGAGTCGCAAAAATGAAGAGTATTGGGGAGGGGCGATTCCTTGGGCTAAAATAAGTGATCTTGAAGCATCTGGAGACGGATACATCCAAACGACTGAGGAAAATATTACCGAAGCTGGCCTTAAAGCAATCAGGGGGCGTATCTTTGATGACGACACATTGCTCTTTGCGATGTACGGATCTGTAGGTAAGACAGCGATAGTCAAAGGGGATATAGCAACAAATCAAGCGATTCTTGGGATCAAGCCACAAAGCGAAAAGCTAGACCTGAAATATTTGCGACATTGGCTAGCTTCACAACAACAAAAATTCGAGCAGGATGCTCAAGGTGTAGCACAGAAAAATTTGTCTGCAGGTTATATTCGTGAATTAGAAATCCCCCTCCCACCGCTACCCGAACAAAAACGCATCGCCGTGATACTCGACAAAGCCGATGCCATCCGCCGCAAACGCCAGCAAGCCATCCAACTCGCCGACGAATTCCTGCGTTCCGTGTTTCTGGACATGTTCGGCGATCCGGTGACGAATCCGAAGGGCTTTCCGCTTGGGACTATCAGAGACTTAACTGAATCAGCTAACTACGGTACGTCGGCTAAAGCTTCTGAAACTGACGGCGAATTTCCAATATTGAGGATGGGCAATATTACTTAG
PROTEIN sequence
Length: 236
MTERLIMLSEVCSVQSGGTPSRKNEEYWGGAIPWAKISDLEASGDGYIQTTEENITEAGLKAIRGRIFDDDTLLFAMYGSVGKTAIVKGDIATNQAILGIKPQSEKLDLKYLRHWLASQQQKFEQDAQGVAQKNLSAGYIRELEIPLPPLPEQKRIAVILDKADAIRRKRQQAIQLADEFLRSVFLDMFGDPVTNPKGFPLGTIRDLTESANYGTSAKASETDGEFPILRMGNIT*