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08E140C01_10kDa_scaffold_2941_2

Organism: BJP_08E140C01_Ig2699_Hor_218_2014_10k_Methylomicrobium_alcaliphilum_49_11

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: comp(630..1220)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SZY6_META2 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 196.0
  • Bit_score: 382
  • Evalue 3.10e-103
  • rbh
rpoE; RNA polymerase sigma-E factor (Sigma-24) similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 196.0
  • Bit_score: 380
  • Evalue 2.50e-103
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methyl similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 196.0
  • Bit_score: 380
  • Evalue 1.20e-102

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Taxonomy

Methylomicrobium alcaliphilum → Methylomicrobium → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGAAAGTTAAAACAGGGACCAGCGAACAACTGGATAAAGACTTAGTGTTGCGCGTACAGCAGGGCGACAAGTCTGCCTTTGATCTATTGGCCATAAAATATCAGTATAAAATAGTTCAACTGGTAAACCGCTATGTCAAGGACCCCAGTGAAGCGCAAGATGTGGCGCAGGAATCTTTTATCAAGGCTTACCGAGCGATTGGTAATTTCAGAGGCGACAGCGCTTTTTATACCTGGCTCTACCGTATTGCCATTAATACCGCAAAAAACTATCTGGTTGCCCGATCGCGGCGTAGTAGCGATTATGAAATCGATATCGACGATGCGGAACAAATACAAAATGCGCCGGAACTAAAGGGTATGGACACGCCGGAACAGCATTTGTTGAATGAAGAAATCCTTGAAACGATCAAAGCCGCAATAGAAAAATTACCGGAGGAAATGCGTATAGCCATTACCTTGCGGGAGTTCGAAGGAATGAGTTATGAAGAAATTGCCGAGGCGATGGAGTGCCCGGTGGGAACTGTTCGATCGCGCATTTTTAGAGCGCGAGAAGCGATCGATAATAAATTAACCCCTTTGCTTAAATGA
PROTEIN sequence
Length: 197
VKVKTGTSEQLDKDLVLRVQQGDKSAFDLLAIKYQYKIVQLVNRYVKDPSEAQDVAQESFIKAYRAIGNFRGDSAFYTWLYRIAINTAKNYLVARSRRSSDYEIDIDDAEQIQNAPELKGMDTPEQHLLNEEILETIKAAIEKLPEEMRIAITLREFEGMSYEEIAEAMECPVGTVRSRIFRAREAIDNKLTPLLK*