ggKbase home page

ACD23_498_1 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
45.5 382.0 321 3.50e-85 rfr:Rfer_3395
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SZ9_RHOFD (db=UNIREF evalue=1.0e-85 bit_score=320.0 identity=47.28 coverage=91.0761154855643) similarity UNIREF
DB: UNIREF
47.28 91.08 320 1.00e-85 rfr:Rfer_3395
seg (db=Seg db_id=seg from=4 to=19) iprscan interpro
DB: Seg
null null null null rfr:Rfer_3395
seg (db=Seg db_id=seg from=303 to=310) iprscan interpro
DB: Seg
null null null null rfr:Rfer_3395
coiled-coil (db=Coil db_id=coil from=20 to=48 evalue=NA) iprscan interpro
DB: Coil
null null null null rfr:Rfer_3395
no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=165 to=272 evalue=2.9e-30) iprscan interpro
DB: Gene3D
null null null 2.90e-30 rfr:Rfer_3395
PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=168 to=271 evalue=8.0e-30) iprscan interpro
DB: superfamily
null null null 8.00e-30 rfr:Rfer_3395
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=290 to=381 evalue=1.2e-28 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signaling pathway (GO:0023034)) iprscan interpro
DB: superfamily
null null null 1.20e-28 rfr:Rfer_3395
GGDEF (db=HMMPfam db_id=PF00990 from=286 to=379 evalue=2.2e-27 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted) iprscan interpro
DB: HMMPfam
null null null 2.20e-27 rfr:Rfer_3395
no description (db=Gene3D db_id=G3DSA:3.30.70.270 from=276 to=381 evalue=3.0e-26) iprscan interpro
DB: Gene3D
null null null 3.00e-26 rfr:Rfer_3395
sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=160 to=281 evalue=8.4e-16 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) iprscan interpro
DB: HMMTigr
null null null 8.40e-16 rfr:Rfer_3395
TWO-COMPONENT SENSOR HISTIDINE KINASE BACTERIA (db=HMMPanther db_id=PTHR23283:SF40 from=26 to=369 evalue=2.2e-14) iprscan interpro
DB: HMMPanther
null null null 2.20e-14 rfr:Rfer_3395
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=26 to=369 evalue=2.2e-14) iprscan interpro
DB: HMMPanther
null null null 2.20e-14 rfr:Rfer_3395
PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=50 to=159 evalue=1.5e-13) iprscan interpro
DB: superfamily
null null null 1.50e-13 rfr:Rfer_3395
PAS_4 (db=HMMPfam db_id=PF08448 from=45 to=153 evalue=6.3e-11 interpro_id=IPR013656 interpro_description=PAS fold-4) iprscan interpro
DB: HMMPfam
null null null 6.30e-11 rfr:Rfer_3395
PAS (db=HMMPfam db_id=PF00989 from=164 to=270 evalue=2.3e-10 interpro_id=IPR013767 interpro_description=PAS fold GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 2.30e-10 rfr:Rfer_3395
sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=35 to=159 evalue=2.6e-09 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) iprscan interpro
DB: HMMTigr
null null null 2.60e-09 rfr:Rfer_3395
no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=29 to=150 evalue=4.9e-09) iprscan interpro
DB: Gene3D
null null null 4.90e-09 rfr:Rfer_3395
no description (db=HMMSmart db_id=SM00267 from=274 to=381 evalue=2.7e-06 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted) iprscan interpro
DB: HMMSmart
null null null 2.70e-06 rfr:Rfer_3395
no description (db=HMMSmart db_id=SM00091 from=160 to=227 evalue=1.1e-05 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) iprscan interpro
DB: HMMSmart
null null null 1.10e-05 rfr:Rfer_3395
no description (db=HMMSmart db_id=SM00086 from=232 to=274 evalue=0.00082 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) iprscan interpro
DB: HMMSmart
null null null 8.20e-04 rfr:Rfer_3395
no description (db=HMMSmart db_id=SM00091 from=39 to=105 evalue=2.7 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) iprscan interpro
DB: HMMSmart
null null null 2.70e+00 rfr:Rfer_3395
PAC (db=ProfileScan db_id=PS50113 from=108 to=161 evalue=8.753 interpro_id=IPR000700 interpro_description=PAS-associated, C-terminal GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)) iprscan interpro
DB: ProfileScan
null null null 8.75e+00 rfr:Rfer_3395
PAC (db=ProfileScan db_id=PS50113 from=231 to=283 evalue=10.295 interpro_id=IPR000700 interpro_description=PAS-associated, C-terminal GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)) iprscan interpro
DB: ProfileScan
null null null 1.03e+01 rfr:Rfer_3395
PAS (db=ProfileScan db_id=PS50112 from=164 to=204 evalue=11.97 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) iprscan interpro
DB: ProfileScan
null null null 1.20e+01 rfr:Rfer_3395
no description (db=HMMSmart db_id=SM00086 from=110 to=152 evalue=16.0 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) iprscan interpro
DB: HMMSmart
null null null 1.60e+01 rfr:Rfer_3395
GGDEF (db=ProfileScan db_id=PS50887 from=315 to=381 evalue=20.643 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted) iprscan interpro
DB: ProfileScan
null null null 2.06e+01 rfr:Rfer_3395
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EKD96939.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
100.0 381.0 752 2.30e-214 K2EEI5_9BACT