ggKbase home page

13_1_20cm_full_scaffold_1063_2

Organism: 13_1_20CM_Betaproteobacteria_67_22

partial RP 19 / 55 BSCG 19 / 51 ASCG 1 / 38
Location: 782..1351

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM11_AZOSU similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 189.0
  • Bit_score: 267
  • Evalue 1.40e-68
DNA-directed RNA polymerase specialized sigma subunit, sigma24; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 176.0
  • Bit_score: 300
  • Evalue 1.60e-78
DNA-directed RNA polymerase specialized sigma subunit, sigma24 similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 189.0
  • Bit_score: 265
  • Evalue 8.70e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Betaproteobacteria_68_20 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
TTGGCATCCCGCAGCGAGCTATCGGCGTTCCTGGAGAGCGTGGAGCGCCGCGCGTTCAAACAGGCAGTGTTCGCGGTGCGGGATGAAGAAGCTGCGCTCGACATCGTCCAGGACGCCATGCTGCGCCTCGCGGAGAAGTACGGGCACCGCCCTGCCGAGGAGCTGCCACTTCTGTTTCACCGCATCGTGCAGAACGCGATCCGCGATTGGTTCCGCCGCCAGAAGGTGCGCTCGCTGTGGACCACGCTGCTCTCCTCGCTTTCACCCAGCCGCGGCGAGGACGATGAACAGGATCCGCTGGAAACCCTGCAGCCCGCCGACGGGTCTAACATGGAGGAAGCGCCGGCAGAGCAGCTGGAGCGAGCTCAAGTGCTTGAAATTATTGAGCAAGAGCTCGCGCGACTGCCTGCTCGTCAACGCGAGGCTTTCGTCATGCGTTACTGGGAGGAGTTGGACGTGGCCGAAACCGCCCGAGTCATGGGCTGCTCGGAGGGCAGCGTGAAAACGCATTGCTCGCGGGCGGCGCATGCCTTGGCGGCCGCACTCAGGGCGCGCGGCATAACGCTGTGA
PROTEIN sequence
Length: 190
LASRSELSAFLESVERRAFKQAVFAVRDEEAALDIVQDAMLRLAEKYGHRPAEELPLLFHRIVQNAIRDWFRRQKVRSLWTTLLSSLSPSRGEDDEQDPLETLQPADGSNMEEAPAEQLERAQVLEIIEQELARLPARQREAFVMRYWEELDVAETARVMGCSEGSVKTHCSRAAHALAAALRARGITL*