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13_1_20cm_full_scaffold_13425_2

Organism: 13_1_20CM_Betaproteobacteria_67_22

partial RP 19 / 55 BSCG 19 / 51 ASCG 1 / 38
Location: comp(434..1027)

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_ similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 197.0
  • Bit_score: 368
  • Evalue 8.40e-99
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 210.0
  • Bit_score: 285
  • Evalue 1.10e-74
3-isopropylmalate dehydratase small subunit n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D87147 similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 210.0
  • Bit_score: 299
  • Evalue 3.40e-78

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Taxonomy

RLO_Betaproteobacteria_68_19 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGGAAAAGTTCACCGTCCTCGATGGCCTGGTCGCGCCGCTGGATAGGGCGAACGTCGACACCGACCAGATCATCCCGAAGGAGCACCTGAAGTCGATCAAGCGCACCGGCTTCGCGTCGGCGCTGTTCGCGGCCTGGCGCCACGATCCGGAATTCGTCCTCAACCGGCCGCGCTATCGCGGCGCGACGATCCTGCTGGCGCGCAAGAATTTCGGCTGCGGCTCCTCGCGCGAGCATGCGCCGTGGGCGCTGTTGGACTACGGCTTTCGCTGCGTGATCGCACCCTCGTTCGCCGACATCTTCTTCAACAACTGCTTCAAGAACGGCCTGCTTCCGGTGGTGCTGAGCGAGACCGAGGTCGATCGCCTGTTCTACGAGTGCGCCTCCTTTCCCGGATTCAAGCTGGTGGTGAACCTGGAGAACCAATCGGTCTCTACCACCGATGGCTCGCAGACCACGCGCTTCGAGGTCGATGCGTTCCGCAAACATTGCCTGCTGAGCGGCCTCGACGAGATCGGCCTCACGCTGCGCCACGCCGACAAGATCCGCGCCTTCGAAGCGCGGCGCAAAGCCCAGTTTCCCTGGTATTTCTGA
PROTEIN sequence
Length: 198
MEKFTVLDGLVAPLDRANVDTDQIIPKEHLKSIKRTGFASALFAAWRHDPEFVLNRPRYRGATILLARKNFGCGSSREHAPWALLDYGFRCVIAPSFADIFFNNCFKNGLLPVVLSETEVDRLFYECASFPGFKLVVNLENQSVSTTDGSQTTRFEVDAFRKHCLLSGLDEIGLTLRHADKIRAFEARRKAQFPWYF*