ggKbase home page

13_1_20cm_full_scaffold_2216_4

Organism: 13_1_20CM_Betaproteobacteria_67_22

partial RP 19 / 55 BSCG 19 / 51 ASCG 1 / 38
Location: comp(2641..3279)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Herbaspirillum sp. CF444 RepID=J3CYH1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 212.0
  • Bit_score: 216
  • Evalue 2.40e-53
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 213.0
  • Bit_score: 356
  • Evalue 2.10e-95
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 214.0
  • Bit_score: 207
  • Evalue 4.10e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGGCCATCAAAATTCTCATCGCCGACGACCACGGCGTGGTCGCCGAGGGCCTCAAGCACCTGGTCGAAGCCCAGGCCGACATGGAGGTGGTGGCCTGTGTCGGCGATGGCCGCGAGGCGGTGCGGCAGTCGCGCGACCTGCAGCCCGACGTCGTGCTGATGGACCTGTCGATGCCCGAGCTGAACGGCGCGGACGCGACGCGCGCCATCCTGCAGCGCGATCCCAGGTGCCGGGTGATCGTGCTGTCGATGTACTCCGACCGCGAATACGTGCGGCGCGCGCTCAAGGCGGGCGCCGCCGGCTATGTGGTAAAGCGCTCCGCGGCCAAGGAGGTCGTCGAGGCGATCCGGGCGGTACACGCCGGCCAGCGCTATCTCAGCCCGCGCGTCGCCGACGTGGTGATCAACGACTATGCCGAAGAGCGCGACGACCCCCTGGCGCGGCTTTCGGCGCGCGAGCGAGAGGTGCTGCAGCTCCTCGCCGAGGGCCGCACCGGCGCCGAGATCGCCCAGAGGCTGTCGCTGTCGCAAAAAACCGTCGAGACTTACCGCGCGCGGCTGGTGGAGAAGCTTGGCATCCGCGACGTGGCGGGCCTGGTGCGCTTCGCCATCCAGCGCGGCCTCGTTTCGCTGGAGTAA
PROTEIN sequence
Length: 213
MAIKILIADDHGVVAEGLKHLVEAQADMEVVACVGDGREAVRQSRDLQPDVVLMDLSMPELNGADATRAILQRDPRCRVIVLSMYSDREYVRRALKAGAAGYVVKRSAAKEVVEAIRAVHAGQRYLSPRVADVVINDYAEERDDPLARLSAREREVLQLLAEGRTGAEIAQRLSLSQKTVETYRARLVEKLGIRDVAGLVRFAIQRGLVSLE*