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13_1_20cm_2_scaffold_8219_7

Organism: 3_1_20CM_2_Acidobacteria_59_7

partial RP 34 / 55 MC: 3 BSCG 31 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 9275..9958

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NR08_GRAMM similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 178.0
  • Bit_score: 222
  • Evalue 4.60e-55
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 206.0
  • Bit_score: 226
  • Evalue 3.50e-56
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 196.0
  • Bit_score: 222
  • Evalue 1.30e-55

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Taxonomy

R_Acidobacteria_61_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 684
GTGAGCAGCGATCCTAATTTCACCGCTCGGTTCGATTCGGACCTTGATTTAGTGAGGCGCGCTCAGCAAGGCGATTCCGATGCGTTTGCCTCCATTTTTCACGCACACAAGGCGAGGATTTATTCCGTCTGCCTGCGCATGACCAACAACATCGCGGAAGCCGAGGATCTTACTCAAGATGCGTTTCTGCAGGTGTTCCGCAAGTTGGTCACTTTTCGAGGTGACTCGGCACTCTCCACCTGGCTCTATCGCATCGCGGTCAATACGGTTCTGATGCATTTCCGCAAGAAAGCCGTGCACCAGATTTCTTTGGATGAGCCTTATAACCGGGATGCCAGACCGGTTCGCCGTGAATATGGGAGTAGGGACGACCGGCTTGCCGGCTCGGTCGATCGCATCACTCTGATCCGGGCGATCAGGGAATTGCCCGCCGGGTACAGAACTATTTTCCTGCTGCACGAAGTCGAAGGCCTCGAGCACCAGGAAATCGCGCGGCTGTTGCATTGCTCGGTGGGAAATTCGAAATCGCAGCTTCATAAAGCAAAGCTGCGGATTCGAGAGTTGCTGGGACGCCGTCGAGCTGCGGCCCAGTACGAAGCAGAGCAGCCCCAGGCAACTCAGGATCAATGGACGGCTGCAGCGGGTTCGGGCCTGCGGCATGAGCAAGCAGCAGCGGCGCTTTAG
PROTEIN sequence
Length: 228
VSSDPNFTARFDSDLDLVRRAQQGDSDAFASIFHAHKARIYSVCLRMTNNIAEAEDLTQDAFLQVFRKLVTFRGDSALSTWLYRIAVNTVLMHFRKKAVHQISLDEPYNRDARPVRREYGSRDDRLAGSVDRITLIRAIRELPAGYRTIFLLHEVEGLEHQEIARLLHCSVGNSKSQLHKAKLRIRELLGRRRAAAQYEAEQPQATQDQWTAAAGSGLRHEQAAAAL*