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13_1_20cm_2_scaffold_493_12

Organism: 13_1_20CM_2_Rokubacteria_68_19

partial RP 22 / 55 MC: 1 BSCG 26 / 51 ASCG 11 / 38
Location: 11896..13644

Top 3 Functional Annotations

Value Algorithm Source
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 582.0
  • Bit_score: 851
  • Evalue 5.70e-244
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=MSBA_SYNAS similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 570.0
  • Bit_score: 540
  • Evalue 2.60e-150
phospholipid-lipopolysaccharide ABC transporter similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 570.0
  • Bit_score: 540
  • Evalue 7.30e-151

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1749
GTGAGCGCGATGCCGCTCGGTCCCTATCGGCGGCTGCTGCCGTACGTGAGGCCGCACGCCCCGATGCTGGTCGTCGGCTCCCTGCTCGCCCTGCTGGTCGCGGCCATGGACGGCGCCGTCGCCTGGCTGGTGAAGCCGGCCATGGACGACATCTTCATCAAGCGCGACCTGCTCATGTTGAAGCTGGTCCCGCTGGGGCTCCTCGCCGCCTACGTCCTCAAGGGCGTCGCCCGTTACCTGCAGTCCTATCTCATGGCGGCGATCGGCGAGAAGGTCGTGGCCACGCTGCGGCGCGACCTCTATATCCACATCCAGGGCATGCCGCTGTCGTTCTTCGCCGGCGTCCACTCCGCCGACCTCATGTCGCGCGTGCTCACCGACGTGAGCCGGCTGTCGCGGATCTCCTCCGGGTTGCTCGTCATGGCGGTCCGGCAGGCCGGCACGATCGTGGCGCTGCTGGTCGTGATGTTCGCCCGCGAGTGGGTGCTCACCGCGTGCGCGCTGGTCGCGTTTCCCTTCATCGCGCTCATCGTCCGCATCGTCGGCCGGCGCCTGTACAAGATCAACAAGCGCGCCCAGGAGCGGGTGGCCCAGCTCGCGGTGCTCCTCCACGAGGCGTTCACCGGCACGAAGATCGTGAAGGCGTTCGGACGCGAGCGCCACGAGCAGGAGCGCTTCGACGCCATCAACCAGCGCCTGCTCCGGCTGTCGCTCCAGAACGTGCGGGCCGACGAGATCACCGAGCCGCTGATGGAGATCGCCGGCGCCTTCGGCATGGTGCTCGCGCTGAGCTACGGCGGCTGGCGCGTGATCCAGGGCGCCATGACGCCCGGCACCTTCTTCTCCTTCACGGCCGCCGTCATCATGCTCTACGGCCCGGCGCGCCGGCTGTCACGCTCGATCAACACCGTGCAGCAGACCACCGGCTCGGTCGAGCGTGTCTTCGACATCATCGACCAGCCACCCGGCCTCGCCGATCGGCCCGGCGCCCTCACCCTGCCCGGGTTCACCGACACGATCGTCTTCGACCACGTCTCGTTCCGCTATGCGCGGGCCGACGAGCTGGCCCTGACCGACATCACGCTGACCATTCGCAAGGGCGAGGTGGTGGCCTTCGTGGGCATGAGCGGCGCCGGCAAGTCCACGCTGATGGACCTGCTGCCGCGCTTCCACGACGTGACGGCCGGCCGGATCACCGTGGACGGCCACGACCTTCGCGATGTGACGCAAGCCTCGCTGCGGGCGCAGATCGCGGTGGTGACCCAGGAGACCTTCCTCTTCGGCGAGTCCATCTACTACAACATCGCGTACGGTCGCCCCGGCGCCGGGACCGACGACGTCGTGCGGGCCGCGCGCCAGGCTCACGCCCACGATTTCATCGTCGCCTGCACCGAAGCCTACGACACGCTCGTGGGCGAGCGCGGCGTGCGGCTGTCCGGCGGCCAGCGCCAGCGCATCGCCATCGCGCGCGCGTTCCTCAAGAATCCGCCTATCCTGATTCTCGACGAGGCCACCTCCGACCTCGACGCCGAGAGCGAGTTCATGGTGCAGCAGGCGCTGACCGAGCTGATGCGCGACCGCACCGTGCTCGTCATTGCGCACCGCCTGTCGACCGTCCGCAACGCCGACCGCATCGTGGTCATCCACGAGGGCCGCGTGGCCGAGGTGGGCCGCCACGAGGAGCTGCTGGCGCGTGACGGCGTCTACCGGAGGCTCTACGCGCTGCAGATGGAGGGCGTGGCGGGCTAG
PROTEIN sequence
Length: 583
VSAMPLGPYRRLLPYVRPHAPMLVVGSLLALLVAAMDGAVAWLVKPAMDDIFIKRDLLMLKLVPLGLLAAYVLKGVARYLQSYLMAAIGEKVVATLRRDLYIHIQGMPLSFFAGVHSADLMSRVLTDVSRLSRISSGLLVMAVRQAGTIVALLVVMFAREWVLTACALVAFPFIALIVRIVGRRLYKINKRAQERVAQLAVLLHEAFTGTKIVKAFGRERHEQERFDAINQRLLRLSLQNVRADEITEPLMEIAGAFGMVLALSYGGWRVIQGAMTPGTFFSFTAAVIMLYGPARRLSRSINTVQQTTGSVERVFDIIDQPPGLADRPGALTLPGFTDTIVFDHVSFRYARADELALTDITLTIRKGEVVAFVGMSGAGKSTLMDLLPRFHDVTAGRITVDGHDLRDVTQASLRAQIAVVTQETFLFGESIYYNIAYGRPGAGTDDVVRAARQAHAHDFIVACTEAYDTLVGERGVRLSGGQRQRIAIARAFLKNPPILILDEATSDLDAESEFMVQQALTELMRDRTVLVIAHRLSTVRNADRIVVIHEGRVAEVGRHEELLARDGVYRRLYALQMEGVAG*